Protein–RNA interactions for Protein: A0A1B0GUT2

LINC00959, HCG1648656, isoform CRA_a, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959A0A1B0GUT2 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LINC00959A0A1B0GUT2 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
LINC00959A0A1B0GUT2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
LINC00959A0A1B0GUT2 AC015813.7-201ENST00000623294 581 ntBASIC19.54■□□□□ 0.72
LINC00959A0A1B0GUT2 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC19.54■□□□□ 0.72
LINC00959A0A1B0GUT2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
LINC00959A0A1B0GUT2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
LINC00959A0A1B0GUT2 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
LINC00959A0A1B0GUT2 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC19.51■□□□□ 0.71
LINC00959A0A1B0GUT2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
LINC00959A0A1B0GUT2 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
LINC00959A0A1B0GUT2 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
LINC00959A0A1B0GUT2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
LINC00959A0A1B0GUT2 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
LINC00959A0A1B0GUT2 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC19.46■□□□□ 0.71
LINC00959A0A1B0GUT2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
LINC00959A0A1B0GUT2 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
LINC00959A0A1B0GUT2 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00959A0A1B0GUT2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
LINC00959A0A1B0GUT2 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00959A0A1B0GUT2 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00959A0A1B0GUT2 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
LINC00959A0A1B0GUT2 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
LINC00959A0A1B0GUT2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
LINC00959A0A1B0GUT2 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC19.39■□□□□ 0.69
LINC00959A0A1B0GUT2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC19.39■□□□□ 0.69
LINC00959A0A1B0GUT2 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LINC00959A0A1B0GUT2 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LINC00959A0A1B0GUT2 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LINC00959A0A1B0GUT2 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC19.32■□□□□ 0.68
LINC00959A0A1B0GUT2 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
LINC00959A0A1B0GUT2 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
LINC00959A0A1B0GUT2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00959A0A1B0GUT2 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
LINC00959A0A1B0GUT2 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LINC00959A0A1B0GUT2 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
LINC00959A0A1B0GUT2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
LINC00959A0A1B0GUT2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC19.27■□□□□ 0.68
LINC00959A0A1B0GUT2 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00959A0A1B0GUT2 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LINC00959A0A1B0GUT2 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LINC00959A0A1B0GUT2 ST7-205ENST00000393446 2114 ntTSL 5 BASIC19.23■□□□□ 0.67
LINC00959A0A1B0GUT2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00959A0A1B0GUT2 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LINC00959A0A1B0GUT2 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LINC00959A0A1B0GUT2 KCTD17-201ENST00000402077 1691 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00959A0A1B0GUT2 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC19.21■□□□□ 0.67
LINC00959A0A1B0GUT2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
LINC00959A0A1B0GUT2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00959A0A1B0GUT2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00959A0A1B0GUT2 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
LINC00959A0A1B0GUT2 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
LINC00959A0A1B0GUT2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC19.18■□□□□ 0.66
LINC00959A0A1B0GUT2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC19.18■□□□□ 0.66
LINC00959A0A1B0GUT2 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
LINC00959A0A1B0GUT2 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
LINC00959A0A1B0GUT2 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00959A0A1B0GUT2 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
LINC00959A0A1B0GUT2 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
LINC00959A0A1B0GUT2 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LINC00959A0A1B0GUT2 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LINC00959A0A1B0GUT2 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00959A0A1B0GUT2 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00959A0A1B0GUT2 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC19.13■□□□□ 0.65
LINC00959A0A1B0GUT2 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LINC00959A0A1B0GUT2 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC19.12■□□□□ 0.65
LINC00959A0A1B0GUT2 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LINC00959A0A1B0GUT2 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
LINC00959A0A1B0GUT2 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC19.11■□□□□ 0.65
LINC00959A0A1B0GUT2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC19.11■□□□□ 0.65
LINC00959A0A1B0GUT2 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
LINC00959A0A1B0GUT2 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LINC00959A0A1B0GUT2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
LINC00959A0A1B0GUT2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LINC00959A0A1B0GUT2 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00959A0A1B0GUT2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC19.07■□□□□ 0.64
LINC00959A0A1B0GUT2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LINC00959A0A1B0GUT2 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LINC00959A0A1B0GUT2 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LINC00959A0A1B0GUT2 BRF1-221ENST00000619151 1530 ntTSL 5 BASIC19.05■□□□□ 0.64
LINC00959A0A1B0GUT2 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
LINC00959A0A1B0GUT2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC19.02■□□□□ 0.64
LINC00959A0A1B0GUT2 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC19.02■□□□□ 0.64
LINC00959A0A1B0GUT2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC00959A0A1B0GUT2 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
LINC00959A0A1B0GUT2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LINC00959A0A1B0GUT2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LINC00959A0A1B0GUT2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC00959A0A1B0GUT2 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC18.96■□□□□ 0.63
LINC00959A0A1B0GUT2 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LINC00959A0A1B0GUT2 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
LINC00959A0A1B0GUT2 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
LINC00959A0A1B0GUT2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC18.94■□□□□ 0.62
LINC00959A0A1B0GUT2 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC18.93■□□□□ 0.62
LINC00959A0A1B0GUT2 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
LINC00959A0A1B0GUT2 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00959A0A1B0GUT2 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
LINC00959A0A1B0GUT2 AC006077.2-201ENST00000623591 457 ntBASIC18.92■□□□□ 0.62
LINC00959A0A1B0GUT2 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
LINC00959A0A1B0GUT2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms