Protein–RNA interactions for Protein: A0A0K0K1C0

TRBV11-1, T-cell receptor beta variable 11-1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV11-1A0A0K0K1C0 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
TRBV11-1A0A0K0K1C0 DYNLL1-208ENST00000550178 581 ntBASIC26.84■■□□□ 1.89
TRBV11-1A0A0K0K1C0 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.84■■□□□ 1.89
TRBV11-1A0A0K0K1C0 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.82■■□□□ 1.88
TRBV11-1A0A0K0K1C0 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
TRBV11-1A0A0K0K1C0 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.82■■□□□ 1.88
TRBV11-1A0A0K0K1C0 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC26.82■■□□□ 1.88
TRBV11-1A0A0K0K1C0 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
TRBV11-1A0A0K0K1C0 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.81■■□□□ 1.88
TRBV11-1A0A0K0K1C0 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TRBV11-1A0A0K0K1C0 AC145285.7-201ENST00000614819 1539 ntBASIC26.78■■□□□ 1.88
TRBV11-1A0A0K0K1C0 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.75■■□□□ 1.87
TRBV11-1A0A0K0K1C0 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC26.73■■□□□ 1.87
TRBV11-1A0A0K0K1C0 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC26.73■■□□□ 1.87
TRBV11-1A0A0K0K1C0 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
TRBV11-1A0A0K0K1C0 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC26.72■■□□□ 1.87
TRBV11-1A0A0K0K1C0 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
TRBV11-1A0A0K0K1C0 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
TRBV11-1A0A0K0K1C0 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
TRBV11-1A0A0K0K1C0 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC26.7■■□□□ 1.86
TRBV11-1A0A0K0K1C0 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
TRBV11-1A0A0K0K1C0 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
TRBV11-1A0A0K0K1C0 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TRBV11-1A0A0K0K1C0 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
TRBV11-1A0A0K0K1C0 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC26.68■■□□□ 1.86
TRBV11-1A0A0K0K1C0 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC26.68■■□□□ 1.86
TRBV11-1A0A0K0K1C0 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TRBV11-1A0A0K0K1C0 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TRBV11-1A0A0K0K1C0 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
TRBV11-1A0A0K0K1C0 AL031258.1-201ENST00000623562 325 ntBASIC26.62■■□□□ 1.85
TRBV11-1A0A0K0K1C0 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
TRBV11-1A0A0K0K1C0 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
TRBV11-1A0A0K0K1C0 PPP1CC-202ENST00000340766 1472 ntTSL 2 BASIC26.59■■□□□ 1.85
TRBV11-1A0A0K0K1C0 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
TRBV11-1A0A0K0K1C0 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRBV11-1A0A0K0K1C0 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TRBV11-1A0A0K0K1C0 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRBV11-1A0A0K0K1C0 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.84
TRBV11-1A0A0K0K1C0 PCYT2-205ENST00000570391 1857 ntTSL 2 BASIC26.51■■□□□ 1.83
TRBV11-1A0A0K0K1C0 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
TRBV11-1A0A0K0K1C0 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC26.44■■□□□ 1.82
TRBV11-1A0A0K0K1C0 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
TRBV11-1A0A0K0K1C0 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.43■■□□□ 1.82
TRBV11-1A0A0K0K1C0 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.42■■□□□ 1.82
TRBV11-1A0A0K0K1C0 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.41■■□□□ 1.82
TRBV11-1A0A0K0K1C0 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.41■■□□□ 1.82
TRBV11-1A0A0K0K1C0 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
TRBV11-1A0A0K0K1C0 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.38■■□□□ 1.81
TRBV11-1A0A0K0K1C0 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC26.38■■□□□ 1.81
TRBV11-1A0A0K0K1C0 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRBV11-1A0A0K0K1C0 EBPL-203ENST00000378270 579 ntTSL 2 BASIC26.36■■□□□ 1.81
TRBV11-1A0A0K0K1C0 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC26.35■■□□□ 1.81
TRBV11-1A0A0K0K1C0 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
TRBV11-1A0A0K0K1C0 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC26.33■■□□□ 1.81
TRBV11-1A0A0K0K1C0 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.32■■□□□ 1.8
TRBV11-1A0A0K0K1C0 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
TRBV11-1A0A0K0K1C0 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
TRBV11-1A0A0K0K1C0 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRBV11-1A0A0K0K1C0 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRBV11-1A0A0K0K1C0 MVK-208ENST00000539696 608 ntTSL 5 BASIC26.29■■□□□ 1.8
TRBV11-1A0A0K0K1C0 FAM89A-201ENST00000366654 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRBV11-1A0A0K0K1C0 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TRBV11-1A0A0K0K1C0 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.23■■□□□ 1.79
TRBV11-1A0A0K0K1C0 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC26.22■■□□□ 1.79
TRBV11-1A0A0K0K1C0 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC26.21■■□□□ 1.79
TRBV11-1A0A0K0K1C0 CYP26C1-201ENST00000285949 1569 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
TRBV11-1A0A0K0K1C0 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC26.2■■□□□ 1.79
TRBV11-1A0A0K0K1C0 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.2■■□□□ 1.78
TRBV11-1A0A0K0K1C0 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRBV11-1A0A0K0K1C0 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TRBV11-1A0A0K0K1C0 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC26.11■■□□□ 1.77
TRBV11-1A0A0K0K1C0 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC26.09■■□□□ 1.77
TRBV11-1A0A0K0K1C0 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.08■■□□□ 1.77
TRBV11-1A0A0K0K1C0 RARRES2P7-201ENST00000567349 469 ntBASIC26.07■■□□□ 1.76
TRBV11-1A0A0K0K1C0 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC26.06■■□□□ 1.76
TRBV11-1A0A0K0K1C0 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.06■■□□□ 1.76
TRBV11-1A0A0K0K1C0 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TRBV11-1A0A0K0K1C0 KLF16-203ENST00000592313 508 ntTSL 3 BASIC26.03■■□□□ 1.76
TRBV11-1A0A0K0K1C0 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
TRBV11-1A0A0K0K1C0 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
TRBV11-1A0A0K0K1C0 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TRBV11-1A0A0K0K1C0 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC25.98■■□□□ 1.75
TRBV11-1A0A0K0K1C0 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TRBV11-1A0A0K0K1C0 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
TRBV11-1A0A0K0K1C0 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC25.96■■□□□ 1.75
TRBV11-1A0A0K0K1C0 CTDNEP1-210ENST00000574322 1708 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
TRBV11-1A0A0K0K1C0 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
TRBV11-1A0A0K0K1C0 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC25.95■■□□□ 1.74
TRBV11-1A0A0K0K1C0 AC079305.1-201ENST00000428541 499 ntTSL 3 BASIC25.94■■□□□ 1.74
TRBV11-1A0A0K0K1C0 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TRBV11-1A0A0K0K1C0 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
TRBV11-1A0A0K0K1C0 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TRBV11-1A0A0K0K1C0 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC25.91■■□□□ 1.74
TRBV11-1A0A0K0K1C0 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TRBV11-1A0A0K0K1C0 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TRBV11-1A0A0K0K1C0 SETD8P1-201ENST00000623146 1180 ntBASIC25.89■■□□□ 1.74
TRBV11-1A0A0K0K1C0 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC25.88■■□□□ 1.73
TRBV11-1A0A0K0K1C0 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
TRBV11-1A0A0K0K1C0 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TRBV11-1A0A0K0K1C0 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC25.85■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms