Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 AC020916.1-201ENST00000587762 1774 ntBASIC17.1■□□□□ 0.33
PCDHB7Q9Y5E2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 VDAC1P7-201ENST00000462417 847 ntBASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 AP001889.1-201ENST00000525414 633 ntBASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 FAM192A-212ENST00000566077 1066 ntTSL 3 BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 AC009486.1-201ENST00000569860 813 ntBASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
PCDHB7Q9Y5E2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.33
PCDHB7Q9Y5E2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB7Q9Y5E2 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB7Q9Y5E2 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB7Q9Y5E2 AC092171.3-201ENST00000610122 2651 ntBASIC17.08■□□□□ 0.33
PCDHB7Q9Y5E2 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
PCDHB7Q9Y5E2 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC17.08■□□□□ 0.33
PCDHB7Q9Y5E2 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.08■□□□□ 0.33
PCDHB7Q9Y5E2 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
PCDHB7Q9Y5E2 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 PACS1-203ENST00000524815 628 ntTSL 4 BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 RCN1-210ENST00000532942 1191 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 AL583810.1-201ENST00000553344 1045 ntBASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 HNRNPUP1-201ENST00000554987 333 ntBASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 RN7SL219P-201ENST00000582872 296 ntBASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
PCDHB7Q9Y5E2 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB7Q9Y5E2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHB7Q9Y5E2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB7Q9Y5E2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC17.07■□□□□ 0.32
PCDHB7Q9Y5E2 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHB7Q9Y5E2 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB7Q9Y5E2 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHB7Q9Y5E2 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB7Q9Y5E2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.07■□□□□ 0.32
PCDHB7Q9Y5E2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
PCDHB7Q9Y5E2 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
PCDHB7Q9Y5E2 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms