Protein–RNA interactions for Protein: Q9HB65

ELL3, RNA polymerase II elongation factor ELL3, humanhuman

Predicted RBP Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ELL3Q9HB65 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ELL3Q9HB65 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ELL3Q9HB65 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
ELL3Q9HB65 CRYGEP-201ENST00000412192 528 ntBASIC14.05□□□□□ -0.16
ELL3Q9HB65 IGLL3P-201ENST00000412472 434 ntBASIC14.05□□□□□ -0.16
ELL3Q9HB65 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ELL3Q9HB65 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
ELL3Q9HB65 MTRF1LP2-201ENST00000506027 1122 ntBASIC14.05□□□□□ -0.16
ELL3Q9HB65 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ELL3Q9HB65 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.05□□□□□ -0.16
ELL3Q9HB65 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.05□□□□□ -0.16
ELL3Q9HB65 AC145285.3-201ENST00000564603 959 ntBASIC14.05□□□□□ -0.16
ELL3Q9HB65 AC018845.2-201ENST00000568326 409 ntBASIC14.05□□□□□ -0.16
ELL3Q9HB65 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.05□□□□□ -0.16
ELL3Q9HB65 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
ELL3Q9HB65 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ELL3Q9HB65 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ELL3Q9HB65 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ELL3Q9HB65 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ELL3Q9HB65 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC14.05□□□□□ -0.16
ELL3Q9HB65 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.05□□□□□ -0.16
ELL3Q9HB65 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC14.05□□□□□ -0.16
ELL3Q9HB65 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ELL3Q9HB65 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ELL3Q9HB65 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ELL3Q9HB65 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
ELL3Q9HB65 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ELL3Q9HB65 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
ELL3Q9HB65 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ELL3Q9HB65 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ELL3Q9HB65 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
ELL3Q9HB65 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.05□□□□□ -0.16
ELL3Q9HB65 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 PPARGC1B-203ENST00000394320 4803 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 AP005117.1-202ENST00000581724 1908 ntBASIC14.04□□□□□ -0.16
ELL3Q9HB65 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 MIR648-201ENST00000385046 94 ntBASIC14.04□□□□□ -0.16
ELL3Q9HB65 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 VN2R19P-201ENST00000442399 1052 ntBASIC14.04□□□□□ -0.16
ELL3Q9HB65 AL513480.1-201ENST00000451731 511 ntBASIC14.04□□□□□ -0.16
ELL3Q9HB65 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 SRC-202ENST00000373558 4304 ntTSL 5 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
ELL3Q9HB65 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
ELL3Q9HB65 U82695.1-201ENST00000635752 1889 ntBASIC14.04□□□□□ -0.16
ELL3Q9HB65 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
ELL3Q9HB65 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
ELL3Q9HB65 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.03□□□□□ -0.16
ELL3Q9HB65 KCNC1-201ENST00000265969 4295 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
ELL3Q9HB65 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
ELL3Q9HB65 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 AC144831.1-201ENST00000573312 2656 ntBASIC14.03□□□□□ -0.16
ELL3Q9HB65 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
ELL3Q9HB65 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms