Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 GPER1-207ENST00000619052 571 ntTSL 2 BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 AL513523.2-202ENST00000427283 2040 ntBASIC14.52□□□□□ -0.09
LRRC46Q96FV0 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 LINC00895-201ENST00000629028 1637 ntBASIC14.52□□□□□ -0.09
LRRC46Q96FV0 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
LRRC46Q96FV0 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 AC022144.1-201ENST00000602255 1580 ntBASIC14.51□□□□□ -0.09
LRRC46Q96FV0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 FAM220BP-201ENST00000377689 816 ntBASIC14.51□□□□□ -0.09
LRRC46Q96FV0 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.51□□□□□ -0.09
LRRC46Q96FV0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 AL138918.1-201ENST00000568306 659 ntBASIC14.51□□□□□ -0.09
LRRC46Q96FV0 AC024267.1-201ENST00000582320 895 ntBASIC14.51□□□□□ -0.09
LRRC46Q96FV0 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 AL590560.3-201ENST00000623350 461 ntBASIC14.51□□□□□ -0.09
LRRC46Q96FV0 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 AC144831.1-201ENST00000573312 2656 ntBASIC14.51□□□□□ -0.09
LRRC46Q96FV0 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 STX3-203ENST00000529177 1571 ntTSL 2 BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LRRC46Q96FV0 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 AC079328.2-201ENST00000561241 3354 ntBASIC14.5□□□□□ -0.09
LRRC46Q96FV0 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 RPS19-201ENST00000221975 500 ntTSL 3 BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 AC092580.3-201ENST00000430932 139 ntBASIC14.5□□□□□ -0.09
LRRC46Q96FV0 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 RNA5SP410-201ENST00000516285 106 ntBASIC14.5□□□□□ -0.09
LRRC46Q96FV0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 MAX-210ENST00000555419 765 ntTSL 5 BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
LRRC46Q96FV0 AC013467.2-201ENST00000605472 835 ntBASIC14.5□□□□□ -0.09
LRRC46Q96FV0 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms