Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 LARS2-202ENST00000414984 2800 ntTSL 5 BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 Metazoa_SRP.79-201ENST00000610676 290 ntBASIC9.78□□□□□ -0.84
SVIPQ8NHG7 Metazoa_SRP.125-201ENST00000618659 283 ntBASIC9.78□□□□□ -0.84
SVIPQ8NHG7 AC119674.1-217ENST00000641942 1086 ntBASIC9.78□□□□□ -0.84
SVIPQ8NHG7 HECTD4-202ENST00000377560 15759 ntAPPRIS P5 TSL 5 BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 AL031595.1-201ENST00000623969 4709 ntBASIC9.78□□□□□ -0.84
SVIPQ8NHG7 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 VPS11-207ENST00000620429 2739 ntTSL 5 BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 CFB-271ENST00000425368 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 GLIPR2-202ENST00000377960 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 AC011893.1-201ENST00000437007 1862 ntTSL 2 BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 MYRF-202ENST00000278836 5927 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 DGKI-213ENST00000614521 2799 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 LINC00273-201ENST00000539813 1452 ntBASIC9.78□□□□□ -0.84
SVIPQ8NHG7 PEAR1-201ENST00000292357 4866 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 QARS-209ENST00000464962 2362 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 ANKS1B-213ENST00000549025 2973 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
SVIPQ8NHG7 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
SVIPQ8NHG7 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
SVIPQ8NHG7 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SVIPQ8NHG7 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
SVIPQ8NHG7 SLC22A13-201ENST00000311856 2555 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
SVIPQ8NHG7 AL512634.1-201ENST00000566873 2432 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SVIPQ8NHG7 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC9.77□□□□□ -0.84
SVIPQ8NHG7 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SVIPQ8NHG7 IK-201ENST00000417647 1962 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
SVIPQ8NHG7 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
SVIPQ8NHG7 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
SVIPQ8NHG7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC9.77□□□□□ -0.84
SVIPQ8NHG7 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.84
SVIPQ8NHG7 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC9.77□□□□□ -0.84
SVIPQ8NHG7 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC9.77□□□□□ -0.84
SVIPQ8NHG7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
SVIPQ8NHG7 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
SVIPQ8NHG7 MED16-204ENST00000395808 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 ZEB2-246ENST00000638128 8932 ntTSL 5 BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 ZBTB1-203ENST00000554015 2825 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 MRPS25-201ENST00000253686 4586 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 BCAS3-202ENST00000407086 3496 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 PKP1-202ENST00000352845 2244 ntTSL 5 BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 TSPEAR-201ENST00000323084 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 Metazoa_SRP.12-201ENST00000553249 268 ntBASIC9.77□□□□□ -0.85
SVIPQ8NHG7 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 VWA5B1-201ENST00000289815 4475 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 AC002480.2-201ENST00000435127 2432 ntTSL 2 BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 CPEB4-207ENST00000519835 2257 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 ACBD5-205ENST00000396271 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 CST3-203ENST00000398411 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 SF3B2-206ENST00000528302 3254 ntTSL 5 BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 BTBD11-202ENST00000357167 4107 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 ATP8A1-202ENST00000381668 8270 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 GPR173-201ENST00000332582 4485 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 AC098934.2-201ENST00000456105 2321 ntTSL 2 BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 RET-205ENST00000615310 4337 ntTSL 5 BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 FGFR2-209ENST00000369056 2650 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 AP002008.2-201ENST00000635926 4870 ntBASIC9.77□□□□□ -0.85
SVIPQ8NHG7 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
SVIPQ8NHG7 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 URM1-204ENST00000452446 2944 ntTSL 2 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 EPHA5-201ENST00000273854 8266 ntAPPRIS P4 TSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 FRG2C-201ENST00000308062 2078 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 FRG2C-202ENST00000464571 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 MPP4-202ENST00000359962 2436 ntTSL 5 BASIC9.76□□□□□ -0.85
SVIPQ8NHG7 HCG18-240ENST00000454269 2430 ntTSL 2 BASIC9.76□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 86.6 ms