RNA–Protein interactions for RNA: ENST00000369056.5

FGFR2-209, Transcript of fibroblast growth factor receptor 2, humanhuman

TSL 1 (best) BASIC

Gene FGFR2, Length 2,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR2-209ENST00000369056 NISCHQ9Y2I1 1504 aa19.99■□□□□ 0.79
FGFR2-209ENST00000369056 SHROOM4Q9ULL8 1493 aa17.55■□□□□ 0.4
FGFR2-209ENST00000369056 SUPT5HO00267 1087 aaKnown RBP17.27■□□□□ 0.36
FGFR2-209ENST00000369056 DCAF8L2P0C7V8 631 aa17.16■□□□□ 0.34
FGFR2-209ENST00000369056 ZCCHC6Q5VYS8 1495 aaKnown RBP16.85■□□□□ 0.29
FGFR2-209ENST00000369056 CCDC180Q9P1Z9 1646 aa16.72■□□□□ 0.27
FGFR2-209ENST00000369056 CHIC1Q5VXU3 224 aa16.63■□□□□ 0.25
FGFR2-209ENST00000369056 MYO15BQ96JP2 1530 aa16.54■□□□□ 0.24
FGFR2-209ENST00000369056 LOC105371045A0A1W2PR82 267 aa16.34■□□□□ 0.21
FGFR2-209ENST00000369056 PCGF6Q9BYE7 350 aa16.33■□□□□ 0.21
FGFR2-209ENST00000369056 PELP1Q8IZL8 1130 aaKnown RBP16.27■□□□□ 0.19
FGFR2-209ENST00000369056 HRCP23327 699 aa16.18■□□□□ 0.18
FGFR2-209ENST00000369056 DCAF1Q9Y4B6 1507 aa16.18■□□□□ 0.18
FGFR2-209ENST00000369056 PPARGC1BQ86YN6 1023 aaKnown RBP16.1■□□□□ 0.17
FGFR2-209ENST00000369056 MYT1Q01538 1121 aa16.09■□□□□ 0.17
FGFR2-209ENST00000369056 EHMT2Q96KQ7 1210 aa16.07■□□□□ 0.16
FGFR2-209ENST00000369056 FAM9AQ8IZU1 332 aaPredicted RBP16.04■□□□□ 0.16
FGFR2-209ENST00000369056 SCRIBQ14160 1630 aa16.03■□□□□ 0.16
FGFR2-209ENST00000369056 RSF1Q96T23 1441 aaPredicted RBP15.95■□□□□ 0.14
FGFR2-209ENST00000369056 TRIM41Q8WV44 630 aa15.94■□□□□ 0.14
FGFR2-209ENST00000369056 ABCC9O60706 1549 aa15.92■□□□□ 0.14
FGFR2-209ENST00000369056 TRIM26Q12899 539 aaPredicted RBP15.81■□□□□ 0.12
FGFR2-209ENST00000369056 SLC24A1O60721 1099 aa15.8■□□□□ 0.12
FGFR2-209ENST00000369056 PRKCSHP14314 528 aaPredicted RBP15.79■□□□□ 0.12
FGFR2-209ENST00000369056 CECR2Q9BXF3 1484 aa15.78■□□□□ 0.12
FGFR2-209ENST00000369056 RB1CC1Q8TDY2 1594 aa15.76■□□□□ 0.11
FGFR2-209ENST00000369056 MROH2BQ7Z745 1585 aa15.65■□□□□ 0.1
FGFR2-209ENST00000369056 TTBK1Q5TCY1 1321 aaPredicted RBP15.59■□□□□ 0.09
FGFR2-209ENST00000369056 WIZO95785 1651 aa15.57■□□□□ 0.08
FGFR2-209ENST00000369056 NACADO15069 1562 aa15.56■□□□□ 0.08
FGFR2-209ENST00000369056 PABPN1Q86U42 306 aaKnown RBP eCLIP15.43■□□□□ 0.06
FGFR2-209ENST00000369056 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.37■□□□□ 0.05
FGFR2-209ENST00000369056 ZEB1P37275 1124 aaPredicted RBP15.37■□□□□ 0.05
FGFR2-209ENST00000369056 ABCC8Q09428 1581 aa15.32■□□□□ 0.04
FGFR2-209ENST00000369056 BAZ1AQ9NRL2 1556 aaPredicted RBP15.3■□□□□ 0.04
FGFR2-209ENST00000369056 APLP2Q06481 763 aa15.29■□□□□ 0.04
FGFR2-209ENST00000369056 CCDC88BA6NC98 1476 aa15.28■□□□□ 0.04
FGFR2-209ENST00000369056 CCER1Q8TC90 406 aaPredicted RBP15.27■□□□□ 0.03
FGFR2-209ENST00000369056 UBTFP17480 764 aaKnown RBP15.25■□□□□ 0.03
FGFR2-209ENST00000369056 SOGA1O94964 1423 aa15.23■□□□□ 0.03
FGFR2-209ENST00000369056 ERICH6Q7L0X2 663 aa15.2■□□□□ 0.02
FGFR2-209ENST00000369056 RUSC2Q8N2Y8 1516 aa15.19■□□□□ 0.02
FGFR2-209ENST00000369056 SMARCA4P51532 1647 aa15.18■□□□□ 0.02
FGFR2-209ENST00000369056 TOP2AP11388 1531 aaKnown RBP15.17■□□□□ 0.02
FGFR2-209ENST00000369056 RANGAP1P46060 587 aaPredicted RBP15.16■□□□□ 0.02
FGFR2-209ENST00000369056 CSRNP3Q8WYN3 585 aa15.16■□□□□ 0.02
FGFR2-209ENST00000369056 EIF4G1Q04637 1599 aaKnown RBP15.16■□□□□ 0.02
FGFR2-209ENST00000369056 SMARCA2P51531 1590 aa15.14■□□□□ 0.01
FGFR2-209ENST00000369056 UNC13AQ9UPW8 1703 aa15.13■□□□□ 0.01
FGFR2-209ENST00000369056 CEP162Q5TB80 1403 aa15.09■□□□□ 0.01
FGFR2-209ENST00000369056 SCAF1Q9H7N4 1312 aaKnown RBP15.04■□□□□ -0
FGFR2-209ENST00000369056 TNIKQ9UKE5 1360 aa15.01□□□□□ -0.01
FGFR2-209ENST00000369056 HNRNPUL2Q1KMD3 747 aaKnown RBP15□□□□□ -0.01
FGFR2-209ENST00000369056 BCL11AQ9H165 835 aa15□□□□□ -0.01
FGFR2-209ENST00000369056 BICRAQ9NZM4 1560 aa14.99□□□□□ -0.01
FGFR2-209ENST00000369056 WRNQ14191 1432 aaPredicted RBP eCLIP14.97□□□□□ -0.01
FGFR2-209ENST00000369056 DIEXFQ68CQ4 756 aaKnown RBP14.95□□□□□ -0.02
FGFR2-209ENST00000369056 GOLGA3Q08378 1498 aa14.89□□□□□ -0.03
FGFR2-209ENST00000369056 NEUROD1Q13562 356 aa14.89□□□□□ -0.03
FGFR2-209ENST00000369056 EEA1Q15075 1411 aa14.87□□□□□ -0.03
FGFR2-209ENST00000369056 DAXXQ9UER7 740 aaPredicted RBP14.87□□□□□ -0.03
FGFR2-209ENST00000369056 SYNJ1O43426 1573 aa14.86□□□□□ -0.03
FGFR2-209ENST00000369056 ATAD2BQ9ULI0 1458 aa14.85□□□□□ -0.03
FGFR2-209ENST00000369056 BAZ1BQ9UIG0 1483 aaKnown RBP14.83□□□□□ -0.04
FGFR2-209ENST00000369056 CLIP1P30622 1438 aa14.82□□□□□ -0.04
FGFR2-209ENST00000369056 ACIN1Q9UKV3 1341 aaKnown RBP14.81□□□□□ -0.04
FGFR2-209ENST00000369056 RAPGEF2Q9Y4G8 1499 aa14.8□□□□□ -0.04
FGFR2-209ENST00000369056 YTHDC1Q96MU7 727 aaKnown RBP14.79□□□□□ -0.04
FGFR2-209ENST00000369056 ZNF316A6NFI3 1004 aaPredicted RBP14.78□□□□□ -0.04
FGFR2-209ENST00000369056 CEP164Q9UPV0 1460 aa14.77□□□□□ -0.04
FGFR2-209ENST00000369056 GTF3C3Q9Y5Q9 886 aa14.75□□□□□ -0.05
FGFR2-209ENST00000369056 PEG3Q9GZU2 1588 aa14.74□□□□□ -0.05
FGFR2-209ENST00000369056 KANK4Q5T7N3 995 aaPredicted RBP14.69□□□□□ -0.06
FGFR2-209ENST00000369056 MIER1Q8N108 512 aa14.68□□□□□ -0.06
FGFR2-209ENST00000369056 VPS8Q8N3P4 1428 aa14.68□□□□□ -0.06
FGFR2-209ENST00000369056 CENPBP07199 599 aaPredicted RBP14.67□□□□□ -0.06
FGFR2-209ENST00000369056 ITGAEP38570 1179 aa14.66□□□□□ -0.06
FGFR2-209ENST00000369056 KIF21BO75037 1637 aa14.65□□□□□ -0.06
FGFR2-209ENST00000369056 TOP2BQ02880 1626 aa14.57□□□□□ -0.08
FGFR2-209ENST00000369056 P3H3Q8IVL6 736 aa14.52□□□□□ -0.08
FGFR2-209ENST00000369056 ATP1B4Q9UN42 357 aaPredicted RBP14.52□□□□□ -0.08
FGFR2-209ENST00000369056 CUX1P39880 1505 aa14.52□□□□□ -0.08
FGFR2-209ENST00000369056 PRXQ9BXM0 1461 aa14.51□□□□□ -0.09
FGFR2-209ENST00000369056 EIF5BO60841 1220 aaKnown RBP14.51□□□□□ -0.09
FGFR2-209ENST00000369056 ARAP1Q96P48 1450 aa14.51□□□□□ -0.09
FGFR2-209ENST00000369056 NCAPD3P42695 1498 aa14.49□□□□□ -0.09
FGFR2-209ENST00000369056 KIF27Q86VH2 1401 aa14.48□□□□□ -0.09
FGFR2-209ENST00000369056 DHX57Q6P158 1386 aaKnown RBP14.46□□□□□ -0.1
FGFR2-209ENST00000369056 BIVM-ERCC5R4GMW8 1640 aa14.45□□□□□ -0.1
FGFR2-209ENST00000369056 CFTRP13569 1480 aa14.42□□□□□ -0.1
FGFR2-209ENST00000369056 CUX2O14529 1486 aa14.4□□□□□ -0.1
FGFR2-209ENST00000369056 IGF1RP08069 1367 aa14.4□□□□□ -0.1
FGFR2-209ENST00000369056 ERICH3Q5RHP9 1530 aa14.4□□□□□ -0.1
FGFR2-209ENST00000369056 ARHGAP35Q9NRY4 1499 aa14.4□□□□□ -0.1
FGFR2-209ENST00000369056 PLEKHG5O94827 1062 aa14.39□□□□□ -0.11
FGFR2-209ENST00000369056 FAM50AQ14320 339 aaKnown RBP14.38□□□□□ -0.11
FGFR2-209ENST00000369056 HMGXB3Q12766 1538 aa14.37□□□□□ -0.11
FGFR2-209ENST00000369056 CCNB3Q8WWL7 1395 aa14.36□□□□□ -0.11
FGFR2-209ENST00000369056 CARMIL1Q5VZK9 1371 aa14.35□□□□□ -0.11
FGFR2-209ENST00000369056 SIN3AQ96ST3 1273 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms