Protein–RNA interactions for Protein: Q4G0U5

CFAP221, Cilia- and flagella-associated protein 221, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP221Q4G0U5 AL136317.3-201ENST00000618497 906 ntBASIC17.49■□□□□ 0.39
CFAP221Q4G0U5 Z92544.3-201ENST00000624747 417 ntBASIC17.49■□□□□ 0.39
CFAP221Q4G0U5 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.49■□□□□ 0.39
CFAP221Q4G0U5 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CFAP221Q4G0U5 PCGF3-213ENST00000620529 1899 ntBASIC17.49■□□□□ 0.39
CFAP221Q4G0U5 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC17.49■□□□□ 0.39
CFAP221Q4G0U5 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CFAP221Q4G0U5 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CFAP221Q4G0U5 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CFAP221Q4G0U5 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CFAP221Q4G0U5 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CFAP221Q4G0U5 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CFAP221Q4G0U5 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CFAP221Q4G0U5 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.49■□□□□ 0.39
CFAP221Q4G0U5 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 FAM86GP-201ENST00000448322 971 ntBASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 ALG1L8P-201ENST00000533887 760 ntBASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 VPS29-207ENST00000549970 818 ntTSL 3 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 AC073439.1-201ENST00000624121 1774 ntBASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CFAP221Q4G0U5 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.47■□□□□ 0.39
CFAP221Q4G0U5 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CFAP221Q4G0U5 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms