Protein–RNA interactions for Protein: Q15768

EFNB3, Ephrin-B3, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB3Q15768 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.62□□□□□ -0.23
EFNB3Q15768 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC13.62□□□□□ -0.23
EFNB3Q15768 RHOA-206ENST00000454011 889 ntTSL 2 BASIC13.62□□□□□ -0.23
EFNB3Q15768 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EFNB3Q15768 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.62□□□□□ -0.23
EFNB3Q15768 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
EFNB3Q15768 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC13.62□□□□□ -0.23
EFNB3Q15768 AP005018.1-201ENST00000525475 301 ntBASIC13.62□□□□□ -0.23
EFNB3Q15768 FTH1-202ENST00000526640 786 ntTSL 2 BASIC13.62□□□□□ -0.23
EFNB3Q15768 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.62□□□□□ -0.23
EFNB3Q15768 TPRX2P-201ENST00000535362 881 ntBASIC13.62□□□□□ -0.23
EFNB3Q15768 RBM7-207ENST00000544582 692 ntTSL 3 BASIC13.62□□□□□ -0.23
EFNB3Q15768 CR383656.12-201ENST00000549567 513 ntBASIC13.62□□□□□ -0.23
EFNB3Q15768 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
EFNB3Q15768 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC13.62□□□□□ -0.23
EFNB3Q15768 RRP7BP-205ENST00000566851 833 ntBASIC13.62□□□□□ -0.23
EFNB3Q15768 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNB3Q15768 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.62□□□□□ -0.23
EFNB3Q15768 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC13.62□□□□□ -0.23
EFNB3Q15768 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.62□□□□□ -0.23
EFNB3Q15768 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC13.62□□□□□ -0.23
EFNB3Q15768 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.62□□□□□ -0.23
EFNB3Q15768 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNB3Q15768 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.62□□□□□ -0.23
EFNB3Q15768 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EFNB3Q15768 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EFNB3Q15768 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNB3Q15768 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EFNB3Q15768 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.62□□□□□ -0.23
EFNB3Q15768 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
EFNB3Q15768 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNB3Q15768 AC063926.2-201ENST00000623766 1308 ntBASIC13.62□□□□□ -0.23
EFNB3Q15768 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.62□□□□□ -0.23
EFNB3Q15768 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNB3Q15768 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC13.62□□□□□ -0.23
EFNB3Q15768 FRMD6-AS1-201ENST00000617151 2229 ntBASIC13.62□□□□□ -0.23
EFNB3Q15768 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNB3Q15768 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNB3Q15768 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
EFNB3Q15768 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
EFNB3Q15768 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC13.61□□□□□ -0.23
EFNB3Q15768 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC13.61□□□□□ -0.23
EFNB3Q15768 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.61□□□□□ -0.23
EFNB3Q15768 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.61□□□□□ -0.23
EFNB3Q15768 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
EFNB3Q15768 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC13.61□□□□□ -0.23
EFNB3Q15768 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
EFNB3Q15768 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
EFNB3Q15768 AC005034.1-201ENST00000426657 489 ntBASIC13.61□□□□□ -0.23
EFNB3Q15768 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.61□□□□□ -0.23
EFNB3Q15768 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.61□□□□□ -0.23
EFNB3Q15768 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.61□□□□□ -0.23
EFNB3Q15768 GAPDHP21-201ENST00000450301 1010 ntBASIC13.61□□□□□ -0.23
EFNB3Q15768 RN7SL692P-201ENST00000464677 288 ntBASIC13.61□□□□□ -0.23
EFNB3Q15768 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.61□□□□□ -0.23
EFNB3Q15768 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
EFNB3Q15768 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.61□□□□□ -0.23
EFNB3Q15768 AL596325.1-201ENST00000563991 1082 ntBASIC13.61□□□□□ -0.23
EFNB3Q15768 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.61□□□□□ -0.23
EFNB3Q15768 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC13.61□□□□□ -0.23
EFNB3Q15768 AC004790.1-201ENST00000612686 536 ntBASIC13.61□□□□□ -0.23
EFNB3Q15768 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
EFNB3Q15768 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.61□□□□□ -0.23
EFNB3Q15768 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC13.61□□□□□ -0.23
EFNB3Q15768 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC13.61□□□□□ -0.23
EFNB3Q15768 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC13.61□□□□□ -0.23
EFNB3Q15768 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
EFNB3Q15768 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
EFNB3Q15768 BANP-204ENST00000393208 2283 ntTSL 2 BASIC13.61□□□□□ -0.23
EFNB3Q15768 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC13.61□□□□□ -0.23
EFNB3Q15768 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.61□□□□□ -0.23
EFNB3Q15768 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
EFNB3Q15768 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.61□□□□□ -0.23
EFNB3Q15768 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
EFNB3Q15768 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
EFNB3Q15768 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC13.6□□□□□ -0.23
EFNB3Q15768 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms