Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.74■□□□□ 0.27
IRX4P78413 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
IRX4P78413 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IRX4P78413 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IRX4P78413 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.74■□□□□ 0.27
IRX4P78413 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
IRX4P78413 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
IRX4P78413 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
IRX4P78413 LINC00895-201ENST00000629028 1637 ntBASIC16.74■□□□□ 0.27
IRX4P78413 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
IRX4P78413 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
IRX4P78413 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
IRX4P78413 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IRX4P78413 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.73■□□□□ 0.27
IRX4P78413 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
IRX4P78413 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX4P78413 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX4P78413 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
IRX4P78413 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IRX4P78413 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IRX4P78413 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
IRX4P78413 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
IRX4P78413 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
IRX4P78413 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
IRX4P78413 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX4P78413 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX4P78413 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IRX4P78413 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
IRX4P78413 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC16.73■□□□□ 0.27
IRX4P78413 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.73■□□□□ 0.27
IRX4P78413 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC16.73■□□□□ 0.27
IRX4P78413 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX4P78413 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.73■□□□□ 0.27
IRX4P78413 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.73■□□□□ 0.27
IRX4P78413 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC16.73■□□□□ 0.27
IRX4P78413 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC16.73■□□□□ 0.27
IRX4P78413 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.73■□□□□ 0.27
IRX4P78413 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
IRX4P78413 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX4P78413 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.73■□□□□ 0.27
IRX4P78413 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC16.73■□□□□ 0.27
IRX4P78413 MIR6080-201ENST00000617359 66 ntBASIC16.73■□□□□ 0.27
IRX4P78413 AL358472.5-202ENST00000641448 1267 ntBASIC16.73■□□□□ 0.27
IRX4P78413 AC084121.4-201ENST00000641598 221 ntBASIC16.73■□□□□ 0.27
IRX4P78413 AF228730.8-201ENST00000642140 221 ntBASIC16.73■□□□□ 0.27
IRX4P78413 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IRX4P78413 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IRX4P78413 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC16.73■□□□□ 0.27
IRX4P78413 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX4P78413 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX4P78413 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IRX4P78413 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
IRX4P78413 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.73■□□□□ 0.27
IRX4P78413 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX4P78413 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
IRX4P78413 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.73■□□□□ 0.27
IRX4P78413 AL365203.3-201ENST00000609742 2057 ntBASIC16.73■□□□□ 0.27
IRX4P78413 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
IRX4P78413 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
IRX4P78413 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.72■□□□□ 0.27
IRX4P78413 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.72■□□□□ 0.27
IRX4P78413 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
IRX4P78413 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 SERBP1P5-201ENST00000510079 1181 ntBASIC16.72■□□□□ 0.27
IRX4P78413 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC16.72■□□□□ 0.27
IRX4P78413 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.72■□□□□ 0.27
IRX4P78413 AL009183.1-201ENST00000603760 355 ntBASIC16.72■□□□□ 0.27
IRX4P78413 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.72■□□□□ 0.27
IRX4P78413 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
IRX4P78413 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
IRX4P78413 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.72■□□□□ 0.27
IRX4P78413 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
IRX4P78413 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC16.72■□□□□ 0.27
IRX4P78413 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.72■□□□□ 0.27
IRX4P78413 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
IRX4P78413 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
IRX4P78413 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.72■□□□□ 0.27
IRX4P78413 DBET-201ENST00000630918 3363 ntBASIC16.72■□□□□ 0.27
IRX4P78413 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
IRX4P78413 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms