Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 RAC2-204ENST00000406508 893 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH8P55286 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 WDR53-203ENST00000429115 683 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH8P55286 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH8P55286 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH8P55286 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.03■□□□□ 0.32
CDH8P55286 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH8P55286 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH8P55286 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH8P55286 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
CDH8P55286 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC17.03■□□□□ 0.32
CDH8P55286 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH8P55286 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC17.03■□□□□ 0.32
CDH8P55286 AL096865.1-201ENST00000606796 927 ntBASIC17.03■□□□□ 0.32
CDH8P55286 AL109936.8-201ENST00000641772 604 ntBASIC17.03■□□□□ 0.32
CDH8P55286 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH8P55286 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH8P55286 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CDH8P55286 AL139384.1-201ENST00000612143 3047 ntBASIC17.03■□□□□ 0.32
CDH8P55286 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDH8P55286 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.03■□□□□ 0.32
CDH8P55286 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.03■□□□□ 0.32
CDH8P55286 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CDH8P55286 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CDH8P55286 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH8P55286 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH8P55286 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH8P55286 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CDH8P55286 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH8P55286 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH8P55286 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH8P55286 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH8P55286 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH8P55286 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.02■□□□□ 0.32
CDH8P55286 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CDH8P55286 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CDH8P55286 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC17.02■□□□□ 0.32
CDH8P55286 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
CDH8P55286 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH8P55286 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH8P55286 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC17.02■□□□□ 0.32
CDH8P55286 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH8P55286 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH8P55286 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CDH8P55286 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH8P55286 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH8P55286 AC025048.3-201ENST00000590609 569 ntBASIC17.02■□□□□ 0.32
CDH8P55286 LINC02084-201ENST00000606069 1096 ntBASIC17.02■□□□□ 0.32
CDH8P55286 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.02■□□□□ 0.32
CDH8P55286 AC005702.4-201ENST00000618393 416 ntBASIC17.02■□□□□ 0.32
CDH8P55286 AC004840.1-201ENST00000636359 365 ntBASIC17.02■□□□□ 0.32
CDH8P55286 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC17.02■□□□□ 0.32
CDH8P55286 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.02■□□□□ 0.31
CDH8P55286 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.31
CDH8P55286 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.02■□□□□ 0.31
CDH8P55286 HYMAI-201ENST00000635591 3347 ntBASIC17.02■□□□□ 0.31
CDH8P55286 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.31
CDH8P55286 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC17.02■□□□□ 0.31
CDH8P55286 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.02■□□□□ 0.31
CDH8P55286 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.02■□□□□ 0.31
CDH8P55286 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC17.02■□□□□ 0.31
CDH8P55286 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
CDH8P55286 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH8P55286 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
CDH8P55286 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH8P55286 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH8P55286 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH8P55286 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH8P55286 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH8P55286 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
CDH8P55286 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH8P55286 KLK8-202ENST00000320838 456 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH8P55286 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
CDH8P55286 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH8P55286 MIR661-201ENST00000384842 89 ntBASIC17.01■□□□□ 0.31
CDH8P55286 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH8P55286 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH8P55286 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
CDH8P55286 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
CDH8P55286 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH8P55286 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH8P55286 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC17.01■□□□□ 0.31
CDH8P55286 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
CDH8P55286 HNRNPUP1-201ENST00000554987 333 ntBASIC17.01■□□□□ 0.31
CDH8P55286 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.01■□□□□ 0.31
CDH8P55286 MIR4313-201ENST00000580760 101 ntBASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms