Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 BCAR1-209ENST00000546196 1340 ntBASIC13.95□□□□□ -0.18
ATP1B3P54709 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.95□□□□□ -0.18
ATP1B3P54709 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC13.95□□□□□ -0.18
ATP1B3P54709 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
ATP1B3P54709 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC13.95□□□□□ -0.18
ATP1B3P54709 AC140658.5-201ENST00000438532 169 ntBASIC13.95□□□□□ -0.18
ATP1B3P54709 HS6ST1P1-201ENST00000481504 1234 ntBASIC13.95□□□□□ -0.18
ATP1B3P54709 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC13.95□□□□□ -0.18
ATP1B3P54709 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.95□□□□□ -0.18
ATP1B3P54709 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC13.95□□□□□ -0.18
ATP1B3P54709 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
ATP1B3P54709 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
ATP1B3P54709 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC13.95□□□□□ -0.18
ATP1B3P54709 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC13.95□□□□□ -0.18
ATP1B3P54709 SLC25A6P4-201ENST00000586535 553 ntBASIC13.95□□□□□ -0.18
ATP1B3P54709 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.95□□□□□ -0.18
ATP1B3P54709 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 RELA-227ENST00000615805 2236 ntTSL 5 BASIC13.95□□□□□ -0.18
ATP1B3P54709 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
ATP1B3P54709 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC13.95□□□□□ -0.18
ATP1B3P54709 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.95□□□□□ -0.18
ATP1B3P54709 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.95□□□□□ -0.18
ATP1B3P54709 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.95□□□□□ -0.18
ATP1B3P54709 PRAL-201ENST00000624952 3286 ntBASIC13.95□□□□□ -0.18
ATP1B3P54709 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
ATP1B3P54709 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC13.95□□□□□ -0.18
ATP1B3P54709 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.94□□□□□ -0.18
ATP1B3P54709 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC13.94□□□□□ -0.18
ATP1B3P54709 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.94□□□□□ -0.18
ATP1B3P54709 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.94□□□□□ -0.18
ATP1B3P54709 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.94□□□□□ -0.18
ATP1B3P54709 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
ATP1B3P54709 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC13.94□□□□□ -0.18
ATP1B3P54709 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC13.94□□□□□ -0.18
ATP1B3P54709 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
ATP1B3P54709 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
ATP1B3P54709 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
ATP1B3P54709 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC13.94□□□□□ -0.18
ATP1B3P54709 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.94□□□□□ -0.18
ATP1B3P54709 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC13.94□□□□□ -0.18
ATP1B3P54709 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
ATP1B3P54709 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC13.94□□□□□ -0.18
ATP1B3P54709 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.94□□□□□ -0.18
ATP1B3P54709 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC13.94□□□□□ -0.18
ATP1B3P54709 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC13.94□□□□□ -0.18
ATP1B3P54709 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 AC025580.3-201ENST00000617932 1424 ntBASIC13.94□□□□□ -0.18
ATP1B3P54709 AL161645.1-201ENST00000622716 1255 ntBASIC13.94□□□□□ -0.18
ATP1B3P54709 AC004877.2-201ENST00000623941 599 ntBASIC13.94□□□□□ -0.18
ATP1B3P54709 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.94□□□□□ -0.18
ATP1B3P54709 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC13.94□□□□□ -0.18
ATP1B3P54709 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.94□□□□□ -0.18
ATP1B3P54709 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
ATP1B3P54709 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC13.94□□□□□ -0.18
ATP1B3P54709 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms