Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LBX1P52954 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LBX1P52954 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LBX1P52954 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LBX1P52954 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
LBX1P52954 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LBX1P52954 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LBX1P52954 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LBX1P52954 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LBX1P52954 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC17.65■□□□□ 0.42
LBX1P52954 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LBX1P52954 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LBX1P52954 AC092053.1-201ENST00000605787 1936 ntBASIC17.65■□□□□ 0.42
LBX1P52954 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LBX1P52954 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LBX1P52954 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LBX1P52954 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC17.65■□□□□ 0.42
LBX1P52954 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC17.65■□□□□ 0.42
LBX1P52954 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LBX1P52954 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC17.65■□□□□ 0.42
LBX1P52954 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC17.65■□□□□ 0.42
LBX1P52954 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC17.65■□□□□ 0.42
LBX1P52954 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
LBX1P52954 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC17.65■□□□□ 0.42
LBX1P52954 IGHEP1-201ENST00000521393 651 ntBASIC17.65■□□□□ 0.42
LBX1P52954 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
LBX1P52954 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.65■□□□□ 0.42
LBX1P52954 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LBX1P52954 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LBX1P52954 LRRC59-203ENST00000576448 1531 ntBASIC17.65■□□□□ 0.42
LBX1P52954 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LBX1P52954 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LBX1P52954 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LBX1P52954 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.65■□□□□ 0.42
LBX1P52954 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC17.65■□□□□ 0.42
LBX1P52954 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.65■□□□□ 0.42
LBX1P52954 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.65■□□□□ 0.42
LBX1P52954 AMT-204ENST00000427987 1646 ntTSL 5 BASIC17.65■□□□□ 0.42
LBX1P52954 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LBX1P52954 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LBX1P52954 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LBX1P52954 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LBX1P52954 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.42
LBX1P52954 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LBX1P52954 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LBX1P52954 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC17.64■□□□□ 0.41
LBX1P52954 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LBX1P52954 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LBX1P52954 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
LBX1P52954 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LBX1P52954 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LBX1P52954 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LBX1P52954 HNRNPA1P58-201ENST00000403629 610 ntBASIC17.64■□□□□ 0.41
LBX1P52954 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.64■□□□□ 0.41
LBX1P52954 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LBX1P52954 OST4-201ENST00000429985 559 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
LBX1P52954 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
LBX1P52954 RPL18AP3-201ENST00000462885 528 ntBASIC17.64■□□□□ 0.41
LBX1P52954 CHTF8-207ENST00000520529 475 ntTSL 2 BASIC17.64■□□□□ 0.41
LBX1P52954 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC17.64■□□□□ 0.41
LBX1P52954 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LBX1P52954 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC17.64■□□□□ 0.41
LBX1P52954 AC005324.6-201ENST00000587972 613 ntBASIC17.64■□□□□ 0.41
LBX1P52954 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LBX1P52954 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LBX1P52954 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC17.64■□□□□ 0.41
LBX1P52954 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LBX1P52954 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LBX1P52954 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
LBX1P52954 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LBX1P52954 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
LBX1P52954 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.63■□□□□ 0.41
LBX1P52954 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC17.63■□□□□ 0.41
LBX1P52954 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LBX1P52954 CHRNA1-203ENST00000409219 1466 ntTSL 3 BASIC17.63■□□□□ 0.41
LBX1P52954 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
LBX1P52954 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC17.63■□□□□ 0.41
LBX1P52954 HLA-A-202ENST00000376806 1854 ntBASIC17.63■□□□□ 0.41
LBX1P52954 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.63■□□□□ 0.41
LBX1P52954 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LBX1P52954 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LBX1P52954 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LBX1P52954 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.63■□□□□ 0.41
LBX1P52954 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LBX1P52954 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LBX1P52954 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LBX1P52954 GHSR-202ENST00000427970 912 ntBASIC17.63■□□□□ 0.41
LBX1P52954 AC130709.1-201ENST00000484779 1212 ntBASIC17.63■□□□□ 0.41
LBX1P52954 RCC2P8-201ENST00000502779 1035 ntBASIC17.63■□□□□ 0.41
LBX1P52954 RAP1B-216ENST00000537460 1072 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LBX1P52954 PTPN20CP-201ENST00000614090 920 ntBASIC17.63■□□□□ 0.41
LBX1P52954 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
LBX1P52954 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LBX1P52954 AC092068.3-201ENST00000587894 2016 ntBASIC17.63■□□□□ 0.41
LBX1P52954 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LBX1P52954 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
LBX1P52954 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC17.63■□□□□ 0.41
LBX1P52954 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.63■□□□□ 0.41
LBX1P52954 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LBX1P52954 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms