Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
SLC6A12P48065 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.39■□□□□ 0.05
SLC6A12P48065 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.39■□□□□ 0.05
SLC6A12P48065 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A12P48065 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A12P48065 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A12P48065 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A12P48065 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A12P48065 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A12P48065 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
SLC6A12P48065 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
SLC6A12P48065 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A12P48065 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
SLC6A12P48065 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A12P48065 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A12P48065 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
SLC6A12P48065 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A12P48065 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A12P48065 AC087481.3-201ENST00000602886 1894 ntBASIC15.38■□□□□ 0.05
SLC6A12P48065 AL607033.1-201ENST00000623900 1599 ntBASIC15.38■□□□□ 0.05
SLC6A12P48065 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A12P48065 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC6A12P48065 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
SLC6A12P48065 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SLC6A12P48065 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A12P48065 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A12P48065 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A12P48065 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.38■□□□□ 0.05
SLC6A12P48065 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC6A12P48065 AL080243.2-201ENST00000418783 582 ntBASIC15.38■□□□□ 0.05
SLC6A12P48065 TSEN15P1-201ENST00000423257 515 ntBASIC15.38■□□□□ 0.05
SLC6A12P48065 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC6A12P48065 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.38■□□□□ 0.05
SLC6A12P48065 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
SLC6A12P48065 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.38■□□□□ 0.05
SLC6A12P48065 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.38■□□□□ 0.05
SLC6A12P48065 COQ4-205ENST00000609948 956 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC6A12P48065 AC006538.3-201ENST00000612495 578 ntBASIC15.38■□□□□ 0.05
SLC6A12P48065 AL691403.2-201ENST00000618460 490 ntBASIC15.38■□□□□ 0.05
SLC6A12P48065 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A12P48065 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A12P48065 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A12P48065 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC6A12P48065 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A12P48065 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A12P48065 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
SLC6A12P48065 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SLC6A12P48065 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
SLC6A12P48065 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A12P48065 AC127383.1-201ENST00000444697 1800 ntBASIC15.38■□□□□ 0.05
SLC6A12P48065 GSN-206ENST00000394353 2311 ntTSL 2 BASIC15.38■□□□□ 0.05
SLC6A12P48065 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A12P48065 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A12P48065 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A12P48065 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
SLC6A12P48065 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC15.37■□□□□ 0.05
SLC6A12P48065 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.37■□□□□ 0.05
SLC6A12P48065 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
SLC6A12P48065 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC15.37■□□□□ 0.05
SLC6A12P48065 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC15.37■□□□□ 0.05
SLC6A12P48065 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC15.37■□□□□ 0.05
SLC6A12P48065 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
SLC6A12P48065 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
SLC6A12P48065 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
SLC6A12P48065 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC15.37■□□□□ 0.05
SLC6A12P48065 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.37■□□□□ 0.05
SLC6A12P48065 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.37■□□□□ 0.05
SLC6A12P48065 PTK7-212ENST00000476760 902 ntTSL 2 BASIC15.37■□□□□ 0.05
SLC6A12P48065 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.37■□□□□ 0.05
SLC6A12P48065 GPALPP1-207ENST00000611650 899 ntBASIC15.37■□□□□ 0.05
SLC6A12P48065 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.37■□□□□ 0.05
SLC6A12P48065 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.37■□□□□ 0.05
SLC6A12P48065 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SLC6A12P48065 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.37■□□□□ 0.05
SLC6A12P48065 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.37■□□□□ 0.05
SLC6A12P48065 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
SLC6A12P48065 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
SLC6A12P48065 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms