Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.52
CLCN1P35523 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN1P35523 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN1P35523 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
CLCN1P35523 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN1P35523 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLCN1P35523 ING5-213ENST00000636051 4199 ntTSL 5 BASIC18.27■□□□□ 0.52
CLCN1P35523 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CLCN1P35523 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CLCN1P35523 AC140479.7-201ENST00000636301 2332 ntBASIC18.27■□□□□ 0.51
CLCN1P35523 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLCN1P35523 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CLCN1P35523 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN1P35523 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCN1P35523 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN1P35523 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN1P35523 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN1P35523 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC18.26■□□□□ 0.51
CLCN1P35523 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCN1P35523 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
CLCN1P35523 TCAF1P1-201ENST00000414990 2232 ntBASIC18.26■□□□□ 0.51
CLCN1P35523 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN1P35523 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN1P35523 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLCN1P35523 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN1P35523 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCN1P35523 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN1P35523 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.26■□□□□ 0.51
CLCN1P35523 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCN1P35523 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.26■□□□□ 0.51
CLCN1P35523 AC021087.4-201ENST00000563761 564 ntBASIC18.26■□□□□ 0.51
CLCN1P35523 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCN1P35523 AC025062.2-201ENST00000605477 670 ntBASIC18.26■□□□□ 0.51
CLCN1P35523 AL139424.1-201ENST00000607572 797 ntBASIC18.26■□□□□ 0.51
CLCN1P35523 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
CLCN1P35523 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN1P35523 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN1P35523 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN1P35523 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC18.26■□□□□ 0.51
CLCN1P35523 LINC01230-201ENST00000625222 3017 ntBASIC18.26■□□□□ 0.51
CLCN1P35523 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN1P35523 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.26■□□□□ 0.51
CLCN1P35523 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.26■□□□□ 0.51
CLCN1P35523 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC18.26■□□□□ 0.51
CLCN1P35523 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN1P35523 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN1P35523 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLCN1P35523 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCN1P35523 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CLCN1P35523 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCN1P35523 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
CLCN1P35523 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
CLCN1P35523 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 NABP1-203ENST00000409510 843 ntTSL 5 BASIC18.25■□□□□ 0.51
CLCN1P35523 DMKN-206ENST00000418261 1257 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 DUSP5P1-201ENST00000441325 1139 ntBASIC18.25■□□□□ 0.51
CLCN1P35523 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.25■□□□□ 0.51
CLCN1P35523 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCN1P35523 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.25■□□□□ 0.51
CLCN1P35523 AC004706.3-202ENST00000621574 984 ntBASIC18.25■□□□□ 0.51
CLCN1P35523 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 AC243591.1-201ENST00000452967 1364 ntBASIC18.25■□□□□ 0.51
CLCN1P35523 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLCN1P35523 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC18.25■□□□□ 0.51
CLCN1P35523 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC18.25■□□□□ 0.51
CLCN1P35523 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC18.25■□□□□ 0.51
CLCN1P35523 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLCN1P35523 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN1P35523 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
CLCN1P35523 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN1P35523 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN1P35523 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN1P35523 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC18.24■□□□□ 0.51
CLCN1P35523 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN1P35523 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.24■□□□□ 0.51
CLCN1P35523 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN1P35523 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC18.24■□□□□ 0.51
CLCN1P35523 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC18.24■□□□□ 0.51
CLCN1P35523 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN1P35523 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.24■□□□□ 0.51
CLCN1P35523 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLCN1P35523 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms