Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC11.83□□□□□ -0.52
CKS2P33552 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC11.83□□□□□ -0.52
CKS2P33552 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.83□□□□□ -0.52
CKS2P33552 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC11.83□□□□□ -0.52
CKS2P33552 CDK2AP2P3-201ENST00000422476 372 ntBASIC11.83□□□□□ -0.52
CKS2P33552 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 KRT18P38-201ENST00000449496 1282 ntBASIC11.83□□□□□ -0.52
CKS2P33552 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.83□□□□□ -0.52
CKS2P33552 AC010203.1-204ENST00000548782 407 ntBASIC11.83□□□□□ -0.52
CKS2P33552 DUT-205ENST00000558813 769 ntTSL 2 BASIC11.83□□□□□ -0.52
CKS2P33552 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC11.83□□□□□ -0.52
CKS2P33552 AL353135.1-201ENST00000606729 504 ntBASIC11.83□□□□□ -0.52
CKS2P33552 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC11.83□□□□□ -0.52
CKS2P33552 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
CKS2P33552 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC11.83□□□□□ -0.52
CKS2P33552 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
CKS2P33552 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
CKS2P33552 MARS-233ENST00000628866 2583 ntTSL 5 BASIC11.83□□□□□ -0.52
CKS2P33552 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CKS2P33552 SIGLEC16-201ENST00000599858 1437 ntBASIC11.83□□□□□ -0.52
CKS2P33552 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC11.83□□□□□ -0.52
CKS2P33552 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 AC008677.1-201ENST00000519230 1561 ntBASIC11.83□□□□□ -0.52
CKS2P33552 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC11.83□□□□□ -0.52
CKS2P33552 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
CKS2P33552 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
CKS2P33552 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC11.83□□□□□ -0.52
CKS2P33552 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
CKS2P33552 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC11.83□□□□□ -0.52
CKS2P33552 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC11.83□□□□□ -0.52
CKS2P33552 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
CKS2P33552 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
CKS2P33552 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CKS2P33552 PPP1R26P4-201ENST00000619065 3527 ntBASIC11.82□□□□□ -0.52
CKS2P33552 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC11.82□□□□□ -0.52
CKS2P33552 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 POLL-206ENST00000370172 2308 ntTSL 2 BASIC11.82□□□□□ -0.52
CKS2P33552 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 AC091951.1-201ENST00000512854 2465 ntBASIC11.82□□□□□ -0.52
CKS2P33552 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC11.82□□□□□ -0.52
CKS2P33552 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC11.82□□□□□ -0.52
CKS2P33552 STK40-201ENST00000359297 4837 ntTSL 2 BASIC11.82□□□□□ -0.52
CKS2P33552 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
CKS2P33552 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC11.82□□□□□ -0.52
CKS2P33552 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC11.82□□□□□ -0.52
CKS2P33552 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC11.82□□□□□ -0.52
CKS2P33552 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC11.82□□□□□ -0.52
CKS2P33552 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
CKS2P33552 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
CKS2P33552 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 CCS-201ENST00000310190 942 ntTSL 5 BASIC11.82□□□□□ -0.52
CKS2P33552 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
CKS2P33552 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC11.82□□□□□ -0.52
CKS2P33552 AL645929.1-201ENST00000420084 975 ntBASIC11.82□□□□□ -0.52
CKS2P33552 STARD13-205ENST00000439831 945 ntTSL 2 BASIC11.82□□□□□ -0.52
CKS2P33552 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 AC145285.6-201ENST00000604632 637 ntBASIC11.82□□□□□ -0.52
CKS2P33552 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 AC007191.1-201ENST00000623179 2995 ntBASIC11.82□□□□□ -0.52
CKS2P33552 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC11.82□□□□□ -0.52
CKS2P33552 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
CKS2P33552 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC11.82□□□□□ -0.52
CKS2P33552 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC11.82□□□□□ -0.52
CKS2P33552 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC11.82□□□□□ -0.52
CKS2P33552 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
CKS2P33552 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC11.82□□□□□ -0.52
CKS2P33552 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
CKS2P33552 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms