Protein–RNA interactions for Protein: P23396

RPS3, 40S ribosomal protein S3, humanhuman

Known RBP eCLIP

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3P23396 AKR1C2-201ENST00000380753 3756 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.284e-6■■□□□ 12
RPS3P23396 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.05■□□□□ 0.488e-18■■□□□ 12
RPS3P23396 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.92■□□□□ 0.468e-18■■□□□ 12
RPS3P23396 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC17.82■□□□□ 0.448e-18■■□□□ 12
RPS3P23396 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.338e-18■■□□□ 12
RPS3P23396 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.338e-18■■□□□ 12
RPS3P23396 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.69■□□□□ 0.268e-18■■□□□ 12
RPS3P23396 MRPL52-213ENST00000556465 220 ntTSL 315.34■□□□□ 0.058e-18■■□□□ 12
RPS3P23396 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.74□□□□□ -0.058e-18■■□□□ 12
RPS3P23396 MRPL52-206ENST00000461594 375 ntTSL 313.41□□□□□ -0.268e-18■■□□□ 12
RPS3P23396 MRPL52-205ENST00000432849 411 ntTSL 2 BASIC11.05□□□□□ -0.648e-18■■□□□ 12
RPS3P23396 MRPL52-204ENST00000397505 333 ntTSL 5 BASIC10.53□□□□□ -0.728e-18■■□□□ 12
RPS3P23396 MRPL52-214ENST00000556654 362 ntTSL 37.41□□□□□ -1.228e-18■■□□□ 12
RPS3P23396 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC15.41■□□□□ 0.061e-7■■□□□ 12
RPS3P23396 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.92□□□□□ -0.021e-7■■□□□ 12
RPS3P23396 LDLR-203ENST00000535915 2768 ntTSL 2 BASIC12.93□□□□□ -0.341e-7■■□□□ 12
RPS3P23396 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.41e-7■■□□□ 12
RPS3P23396 LDLR-205ENST00000557933 2941 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.531e-7■■□□□ 12
RPS3P23396 LDLR-208ENST00000558518 3617 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.671e-7■■□□□ 12
RPS3P23396 A2M-212ENST00000545828 471 ntTSL 44.99□□□□□ -1.613e-39■■□□□ 12
RPS3P23396 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.8■■□□□ 1.568e-9■■□□□ 12
RPS3P23396 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.46■□□□□ 0.558e-9■■□□□ 12
RPS3P23396 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.428e-9■■□□□ 12
RPS3P23396 CTSA-214ENST00000606788 3056 ntTSL 215.54■□□□□ 0.088e-9■■□□□ 12
RPS3P23396 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC15.47■□□□□ 0.078e-9■■□□□ 12
RPS3P23396 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.11■□□□□ 0.491e-6■■□□□ 12
RPS3P23396 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.181e-6■■□□□ 12
RPS3P23396 PSMD2-208ENST00000459910 676 ntTSL 521.82■■□□□ 1.083e-11■■□□□ 12
RPS3P23396 PSMD2-204ENST00000433010 942 ntTSL 320.4■□□□□ 0.863e-11■■□□□ 12
RPS3P23396 BAG6-250ENST00000451898 993 ntTSL 318.09■□□□□ 0.491e-21■■□□□ 12
RPS3P23396 PSMD2-202ENST00000417952 721 ntTSL 318.05■□□□□ 0.483e-11■■□□□ 12
RPS3P23396 BAG6-243ENST00000434444 766 ntTSL 317.3■□□□□ 0.361e-21■■□□□ 12
RPS3P23396 BAG6-248ENST00000441054 654 ntTSL 317.3■□□□□ 0.361e-21■■□□□ 12
RPS3P23396 PSMD2-215ENST00000487475 910 ntTSL 216.66■□□□□ 0.263e-11■■□□□ 12
RPS3P23396 BAG6-240ENST00000424480 1056 ntTSL 216.07■□□□□ 0.161e-21■■□□□ 12
RPS3P23396 BAG6-251ENST00000452994 880 ntTSL 315.96■□□□□ 0.151e-21■■□□□ 12
RPS3P23396 PSPH-204ENST00000416592 739 ntTSL 515.75■□□□□ 0.113e-11■■□□□ 12
RPS3P23396 BAG6-244ENST00000435080 1710 ntTSL 514.44□□□□□ -0.11e-21■■□□□ 12
RPS3P23396 NRBP1-206ENST00000460499 2561 ntTSL 213.44□□□□□ -0.263e-11■■□□□ 12
RPS3P23396 PSPH-203ENST00000413218 539 ntTSL 413.41□□□□□ -0.263e-11■■□□□ 12
RPS3P23396 PSPH-208ENST00000424596 555 ntTSL 413.03□□□□□ -0.323e-11■■□□□ 12
RPS3P23396 ALDH5A1-205ENST00000492697 470 ntTSL 212.98□□□□□ -0.333e-11■■□□□ 12
RPS3P23396 BAG6-254ENST00000456286 807 ntTSL 1 (best)12.93□□□□□ -0.341e-21■■□□□ 12
RPS3P23396 BAG6-253ENST00000454165 544 ntTSL 312.43□□□□□ -0.421e-21■■□□□ 12
RPS3P23396 PSPH-212ENST00000472276 572 ntTSL 411.93□□□□□ -0.53e-11■■□□□ 12
RPS3P23396 BAG6-255ENST00000456622 859 ntTSL 511.88□□□□□ -0.511e-21■■□□□ 12
RPS3P23396 BAG6-241ENST00000428326 1051 ntTSL 511.74□□□□□ -0.531e-21■■□□□ 12
RPS3P23396 BAG6-239ENST00000424176 747 ntTSL 311.32□□□□□ -0.61e-21■■□□□ 12
RPS3P23396 PSMD2-214ENST00000485937 603 ntTSL 211.11□□□□□ -0.633e-11■■□□□ 12
RPS3P23396 MAGED2-209ENST00000485483 691 ntTSL 210.81□□□□□ -0.689e-7■■□□□ 12
RPS3P23396 BAG6-242ENST00000433828 902 ntTSL 210.22□□□□□ -0.771e-21■■□□□ 12
RPS3P23396 PSMD2-207ENST00000445558 825 ntTSL 510.15□□□□□ -0.783e-11■■□□□ 12
RPS3P23396 ALDH5A1-203ENST00000479394 1068 ntTSL 29.26□□□□□ -0.933e-11■■□□□ 12
RPS3P23396 HNRNPM-210ENST00000598367 298 ntTSL 58.87□□□□□ -0.993e-11■■□□□ 12
RPS3P23396 NRBP1-207ENST00000486701 813 ntTSL 38.07□□□□□ -1.123e-11■■□□□ 12
RPS3P23396 HERPUD1-209ENST00000564678 2199 ntTSL 1 (best)7.17□□□□□ -1.266e-7■■□□□ 12
RPS3P23396 PSMD2-210ENST00000463602 576 ntTSL 46.62□□□□□ -1.353e-11■■□□□ 12
RPS3P23396 HERPUD1-214ENST00000568651 458 ntTSL 35.26□□□□□ -1.576e-7■■□□□ 12
RPS3P23396 HERPUD1-208ENST00000563911 844 ntTSL 35.09□□□□□ -1.596e-7■■□□□ 12
RPS3P23396 HERPUD1-213ENST00000568358 751 ntTSL 54.46□□□□□ -1.76e-7■■□□□ 12
RPS3P23396 DDX6-201ENST00000525082 1232 ntTSL 210.04□□□□□ -0.88e-7■■□□□ 12
RPS3P23396 GNAS-256ENST00000603546 573 ntTSL 526.16■■□□□ 1.781e-13■■□□□ 12
RPS3P23396 GNAS-228ENST00000469431 702 ntTSL 525.3■■□□□ 1.641e-13■■□□□ 12
RPS3P23396 GNAS-257ENST00000604005 693 ntTSL 325.3■■□□□ 1.641e-13■■□□□ 12
RPS3P23396 GNAS-226ENST00000467321 733 ntTSL 518.42■□□□□ 0.541e-13■■□□□ 12
RPS3P23396 GNAS-230ENST00000472183 911 ntTSL 317.3■□□□□ 0.361e-13■■□□□ 12
RPS3P23396 GNAS-223ENST00000464788 583 ntTSL 215.84■□□□□ 0.131e-13■■□□□ 12
RPS3P23396 GNAS-249ENST00000490374 675 ntTSL 315.05■□□□□ -01e-13■■□□□ 12
RPS3P23396 GNAS-241ENST00000482112 704 ntTSL 313.31□□□□□ -0.281e-13■■□□□ 12
RPS3P23396 GNAS-253ENST00000493958 534 ntTSL 210.71□□□□□ -0.691e-13■■□□□ 12
RPS3P23396 GNAS-246ENST00000487981 581 ntTSL 510.19□□□□□ -0.781e-13■■□□□ 12
RPS3P23396 GNAS-218ENST00000450130 595 ntTSL 58.54□□□□□ -1.041e-13■■□□□ 12
RPS3P23396 GNAS-225ENST00000467227 543 ntTSL 38.33□□□□□ -1.081e-13■■□□□ 12
RPS3P23396 GNAS-227ENST00000468895 583 ntTSL 37.64□□□□□ -1.191e-13■■□□□ 12
RPS3P23396 CKAP4-202ENST00000552828 831 ntTSL 311.27□□□□□ -0.613e-14■■□□□ 12
RPS3P23396 CCND1-201ENST00000227507 4307 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.641e-6■■□□□ 12
RPS3P23396 PTBP1-219ENST00000621737 1125 ntTSL 519.05■□□□□ 0.646e-9■■□□□ 12
RPS3P23396 PTBP1-208ENST00000585956 767 ntTSL 318.56■□□□□ 0.566e-9■■□□□ 12
RPS3P23396 EEF1A1-206ENST00000488500 792 ntTSL 27.22□□□□□ -1.256e-17■■□□□ 12
RPS3P23396 EEF1A1-209ENST00000495333 958 ntTSL 56.28□□□□□ -1.46e-17■■□□□ 12
RPS3P23396 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.838e-8■■□□□ 12
RPS3P23396 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.49■■□□□ 1.518e-8■■□□□ 12
RPS3P23396 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.22■□□□□ 0.352e-8■■□□□ 12
RPS3P23396 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.4■□□□□ 0.222e-8■■□□□ 12
RPS3P23396 NMU-202ENST00000505262 693 ntTSL 3 BASIC16.3■□□□□ 0.22e-8■■□□□ 12
RPS3P23396 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.092e-8■■□□□ 12
RPS3P23396 NMU-206ENST00000515325 616 ntTSL 32.83□□□□□ -1.962e-8■■□□□ 12
RPS3P23396 HMGCS1-205ENST00000508319 591 ntTSL 312.5□□□□□ -0.414e-17■■□□□ 11.9
RPS3P23396 ATG9A-220ENST00000475339 812 ntTSL 213.37□□□□□ -0.273e-7■■□□□ 11.9
RPS3P23396 GLS-213ENST00000479552 2016 ntTSL 1 (best)24.67■■□□□ 1.544e-10■■□□□ 11.9
RPS3P23396 CAPRIN1-208ENST00000530008 580 ntTSL 42.55□□□□□ -22e-6■■□□□ 11.9
RPS3P23396 CLPTM1-205ENST00000586915 775 ntTSL 216.8■□□□□ 0.286e-8■■□□□ 11.9
RPS3P23396 NAGPA-215ENST00000569296 866 ntTSL 516.6■□□□□ 0.252e-6■■□□□ 11.9
RPS3P23396 NAGPA-210ENST00000565876 544 ntTSL 413.73□□□□□ -0.212e-6■■□□□ 11.9
RPS3P23396 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC19.63■□□□□ 0.735e-7■■□□□ 11.9
RPS3P23396 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.625e-7■■□□□ 11.9
RPS3P23396 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.79■□□□□ 0.445e-7■■□□□ 11.9
RPS3P23396 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.35■□□□□ 0.375e-7■■□□□ 11.9
RPS3P23396 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC14.13□□□□□ -0.155e-7■■□□□ 11.9
RPS3P23396 TMC6-210ENST00000588792 843 ntTSL 217.83■□□□□ 0.441e-8■■□□□ 11.9
Retrieved 100 of 24,271 protein–RNA pairs in 289.2 ms