RNA–Protein interactions for RNA: ENST00000488500.1

EEF1A1-206, Transcript of eukaryotic translation elongation factor 1 alpha 1, humanhuman

TSL 2

Gene EEF1A1, Length 792 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EEF1A1-206ENST00000488500 AEBP2Q6ZN18 517 aaPredicted RBP21.89■■□□□ 1.09
EEF1A1-206ENST00000488500 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
EEF1A1-206ENST00000488500 SENP3Q9H4L4 574 aaPredicted RBP18.62■□□□□ 0.57
EEF1A1-206ENST00000488500 PHF23Q9BUL5 403 aaPredicted RBP18.43■□□□□ 0.54
EEF1A1-206ENST00000488500 FOXD1Q16676 465 aa17.33■□□□□ 0.36
EEF1A1-206ENST00000488500 PLPPR3Q6T4P5 718 aa16.88■□□□□ 0.29
EEF1A1-206ENST00000488500 PPP6R1Q9UPN7 881 aa16.39■□□□□ 0.21
EEF1A1-206ENST00000488500 ADRA2BP18089 450 aa16.35■□□□□ 0.21
EEF1A1-206ENST00000488500 PIAS4Q8N2W9 510 aaPredicted RBP16.26■□□□□ 0.19
EEF1A1-206ENST00000488500 NISCHQ9Y2I1 1504 aa16.18■□□□□ 0.18
EEF1A1-206ENST00000488500 MSH5O43196 834 aa16.12■□□□□ 0.17
EEF1A1-206ENST00000488500 POTEDQ86YR6 584 aa15.36■□□□□ 0.05
EEF1A1-206ENST00000488500 MAPK8IP2Q13387 824 aaPredicted RBP14.95□□□□□ -0.02
EEF1A1-206ENST00000488500 SCAF1Q9H7N4 1312 aaKnown RBP14.94□□□□□ -0.02
EEF1A1-206ENST00000488500 PPP4R3CPQ6ZMV5 832 aa14.83□□□□□ -0.04
EEF1A1-206ENST00000488500 DMRT2Q9Y5R5 561 aa14.81□□□□□ -0.04
EEF1A1-206ENST00000488500 CNKSR2Q8WXI2 1034 aa14.5□□□□□ -0.09
EEF1A1-206ENST00000488500 HOXD11P31277 338 aaPredicted RBP14.35□□□□□ -0.11
EEF1A1-206ENST00000488500 NCBP3Q53F19 620 aaKnown RBP14.32□□□□□ -0.12
EEF1A1-206ENST00000488500 RNF216Q9NWF9 866 aaPredicted RBP14.3□□□□□ -0.12
EEF1A1-206ENST00000488500 DCAF8L1A6NGE4 600 aa14.19□□□□□ -0.14
EEF1A1-206ENST00000488500 CCDC180Q9P1Z9 1646 aa14.14□□□□□ -0.15
EEF1A1-206ENST00000488500 NPM3O75607 178 aaKnown RBP14.12□□□□□ -0.15
EEF1A1-206ENST00000488500 KCNA4P22459 653 aa14.06□□□□□ -0.16
EEF1A1-206ENST00000488500 EHMT2Q96KQ7 1210 aa13.9□□□□□ -0.18
EEF1A1-206ENST00000488500 DNAJC5BQ9UF47 199 aa13.8□□□□□ -0.2
EEF1A1-206ENST00000488500 RNF39Q9H2S5 420 aa13.79□□□□□ -0.2
EEF1A1-206ENST00000488500 CACNB1Q02641 598 aaPredicted RBP13.7□□□□□ -0.22
EEF1A1-206ENST00000488500 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.67□□□□□ -0.22
EEF1A1-206ENST00000488500 C1QBPQ07021 282 aaKnown RBP13.58□□□□□ -0.24
EEF1A1-206ENST00000488500 ZCCHC6Q5VYS8 1495 aaKnown RBP13.56□□□□□ -0.24
EEF1A1-206ENST00000488500 DCAF1Q9Y4B6 1507 aa13.5□□□□□ -0.25
EEF1A1-206ENST00000488500 SLC4A2P04920 1241 aa13.43□□□□□ -0.26
EEF1A1-206ENST00000488500 SLC4A1APQ9BWU0 796 aaKnown RBP13.42□□□□□ -0.26
EEF1A1-206ENST00000488500 U3KPZ7 1027 aaPredicted RBP13.42□□□□□ -0.26
EEF1A1-206ENST00000488500 MYO15BQ96JP2 1530 aa13.42□□□□□ -0.26
EEF1A1-206ENST00000488500 DCAF8L2P0C7V8 631 aa13.36□□□□□ -0.27
EEF1A1-206ENST00000488500 CSRNP3Q8WYN3 585 aa13.36□□□□□ -0.27
EEF1A1-206ENST00000488500 ABCC9O60706 1549 aa13.29□□□□□ -0.28
EEF1A1-206ENST00000488500 NACADO15069 1562 aa13.26□□□□□ -0.29
EEF1A1-206ENST00000488500 SPINK5Q9NQ38 1064 aaPredicted RBP13.16□□□□□ -0.3
EEF1A1-206ENST00000488500 RB1CC1Q8TDY2 1594 aa13.12□□□□□ -0.31
EEF1A1-206ENST00000488500 CAPN15O75808 1086 aa13.11□□□□□ -0.31
EEF1A1-206ENST00000488500 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.1□□□□□ -0.31
EEF1A1-206ENST00000488500 HNRNPUL2Q1KMD3 747 aaKnown RBP13.1□□□□□ -0.31
EEF1A1-206ENST00000488500 MYCNP04198 464 aaPredicted RBP13.05□□□□□ -0.32
EEF1A1-206ENST00000488500 APLP2Q06481 763 aa13.05□□□□□ -0.32
EEF1A1-206ENST00000488500 SAMD1Q6SPF0 538 aaPredicted RBP13.04□□□□□ -0.32
EEF1A1-206ENST00000488500 FOXD4L1Q9NU39 408 aa13.04□□□□□ -0.32
EEF1A1-206ENST00000488500 DSG3P32926 999 aa12.99□□□□□ -0.33
EEF1A1-206ENST00000488500 SHROOM4Q9ULL8 1493 aa12.97□□□□□ -0.33
EEF1A1-206ENST00000488500 TRHP20396 242 aaPredicted RBP12.97□□□□□ -0.33
EEF1A1-206ENST00000488500 ZNF219Q9P2Y4 722 aaPredicted RBP12.95□□□□□ -0.34
EEF1A1-206ENST00000488500 ZBTB22O15209 634 aa12.94□□□□□ -0.34
EEF1A1-206ENST00000488500 ABCB7O75027 752 aa12.84□□□□□ -0.35
EEF1A1-206ENST00000488500 SCRIBQ14160 1630 aa12.84□□□□□ -0.35
EEF1A1-206ENST00000488500 ATF5Q9Y2D1 282 aaPredicted RBP12.75□□□□□ -0.37
EEF1A1-206ENST00000488500 POLA2Q14181 598 aa12.66□□□□□ -0.38
EEF1A1-206ENST00000488500 ATXN8OSP0DMR3 200 aa12.62□□□□□ -0.39
EEF1A1-206ENST00000488500 SUPT5HO00267 1087 aaKnown RBP12.59□□□□□ -0.39
EEF1A1-206ENST00000488500 BAZ1AQ9NRL2 1556 aaPredicted RBP12.55□□□□□ -0.4
EEF1A1-206ENST00000488500 BICRAQ9NZM4 1560 aa12.53□□□□□ -0.4
EEF1A1-206ENST00000488500 PABPN1Q86U42 306 aaKnown RBP eCLIP12.53□□□□□ -0.4
EEF1A1-206ENST00000488500 UNC13AQ9UPW8 1703 aa12.53□□□□□ -0.4
EEF1A1-206ENST00000488500 RSF1Q96T23 1441 aaPredicted RBP12.51□□□□□ -0.41
EEF1A1-206ENST00000488500 CECR2Q9BXF3 1484 aa12.44□□□□□ -0.42
EEF1A1-206ENST00000488500 SLC24A1O60721 1099 aa12.43□□□□□ -0.42
EEF1A1-206ENST00000488500 ZBTB12Q9Y330 459 aaPredicted RBP12.42□□□□□ -0.42
EEF1A1-206ENST00000488500 AMER1Q5JTC6 1135 aaPredicted RBP12.39□□□□□ -0.43
EEF1A1-206ENST00000488500 MROH2BQ7Z745 1585 aa12.39□□□□□ -0.43
EEF1A1-206ENST00000488500 SMARCA4P51532 1647 aa12.38□□□□□ -0.43
EEF1A1-206ENST00000488500 RBM42Q9BTD8 480 aaKnown RBP12.38□□□□□ -0.43
EEF1A1-206ENST00000488500 SMARCA2P51531 1590 aa12.34□□□□□ -0.43
EEF1A1-206ENST00000488500 PEG3Q9GZU2 1588 aa12.33□□□□□ -0.44
EEF1A1-206ENST00000488500 RTN4Q9NQC3 1192 aaKnown RBP12.31□□□□□ -0.44
EEF1A1-206ENST00000488500 OSCARQ8IYS5 282 aa12.26□□□□□ -0.45
EEF1A1-206ENST00000488500 TOP2AP11388 1531 aaKnown RBP12.26□□□□□ -0.45
EEF1A1-206ENST00000488500 ATAD2BQ9ULI0 1458 aa12.25□□□□□ -0.45
EEF1A1-206ENST00000488500 EIF4G1Q04637 1599 aaKnown RBP12.25□□□□□ -0.45
EEF1A1-206ENST00000488500 NCAPD3P42695 1498 aa12.24□□□□□ -0.45
EEF1A1-206ENST00000488500 FBLN2P98095 1184 aa12.22□□□□□ -0.45
EEF1A1-206ENST00000488500 WIZO95785 1651 aa12.22□□□□□ -0.45
EEF1A1-206ENST00000488500 BAZ1BQ9UIG0 1483 aaKnown RBP12.21□□□□□ -0.45
EEF1A1-206ENST00000488500 HMGXB3Q12766 1538 aa12.19□□□□□ -0.46
EEF1A1-206ENST00000488500 MKRN4PQ13434 485 aaPredicted RBP12.16□□□□□ -0.46
EEF1A1-206ENST00000488500 AKT1S1Q96B36 256 aa12.15□□□□□ -0.46
EEF1A1-206ENST00000488500 CCDC88BA6NC98 1476 aa12.09□□□□□ -0.47
EEF1A1-206ENST00000488500 POTEHQ6S545 545 aa12.08□□□□□ -0.48
EEF1A1-206ENST00000488500 SPDYE2BA6NHP3 402 aa12.06□□□□□ -0.48
EEF1A1-206ENST00000488500 SPDYE6P0CI01 402 aa12.06□□□□□ -0.48
EEF1A1-206ENST00000488500 FKBP8Q14318 412 aa12.06□□□□□ -0.48
EEF1A1-206ENST00000488500 SPDYE2Q495Y8 402 aa12.06□□□□□ -0.48
EEF1A1-206ENST00000488500 REM2Q8IYK8 340 aaPredicted RBP12.04□□□□□ -0.48
EEF1A1-206ENST00000488500 CC2D2AQ9P2K1 1620 aa12.04□□□□□ -0.48
EEF1A1-206ENST00000488500 CHRDL2Q6WN34 429 aa12.03□□□□□ -0.48
EEF1A1-206ENST00000488500 TRIM41Q8WV44 630 aa11.98□□□□□ -0.49
EEF1A1-206ENST00000488500 ZNF692Q9BU19 519 aaPredicted RBP11.96□□□□□ -0.49
EEF1A1-206ENST00000488500 SSUH2Q9Y2M2 353 aa11.94□□□□□ -0.5
EEF1A1-206ENST00000488500 CADPSQ9ULU8 1353 aa11.92□□□□□ -0.5
EEF1A1-206ENST00000488500 CFTRP13569 1480 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms