Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
APOA1P02647 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
APOA1P02647 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
APOA1P02647 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 NIN-202ENST00000324330 4364 ntTSL 5 BASIC14.34□□□□□ -0.11
APOA1P02647 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
APOA1P02647 MIR193BHG-211ENST00000641433 5365 ntBASIC14.34□□□□□ -0.11
APOA1P02647 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC14.34□□□□□ -0.11
APOA1P02647 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.34□□□□□ -0.11
APOA1P02647 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC14.34□□□□□ -0.11
APOA1P02647 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.34□□□□□ -0.11
APOA1P02647 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.34□□□□□ -0.11
APOA1P02647 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 AC131212.3-201ENST00000624087 4219 ntBASIC14.34□□□□□ -0.11
APOA1P02647 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
APOA1P02647 AC009533.2-201ENST00000543664 586 ntBASIC14.34□□□□□ -0.11
APOA1P02647 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.34□□□□□ -0.11
APOA1P02647 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC14.34□□□□□ -0.11
APOA1P02647 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.34□□□□□ -0.11
APOA1P02647 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
APOA1P02647 TERC-201ENST00000602385 541 ntBASIC14.34□□□□□ -0.11
APOA1P02647 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.34□□□□□ -0.11
APOA1P02647 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
APOA1P02647 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC14.34□□□□□ -0.11
APOA1P02647 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.34□□□□□ -0.11
APOA1P02647 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC14.34□□□□□ -0.11
APOA1P02647 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
APOA1P02647 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
APOA1P02647 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.34□□□□□ -0.11
APOA1P02647 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.34□□□□□ -0.11
APOA1P02647 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.34□□□□□ -0.11
APOA1P02647 KRT18P22-201ENST00000402024 1347 ntBASIC14.34□□□□□ -0.11
APOA1P02647 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC14.34□□□□□ -0.11
APOA1P02647 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC14.34□□□□□ -0.11
APOA1P02647 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
APOA1P02647 NEK10-206ENST00000429845 4250 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
APOA1P02647 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.34□□□□□ -0.11
APOA1P02647 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.34□□□□□ -0.11
APOA1P02647 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
APOA1P02647 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
APOA1P02647 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
APOA1P02647 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
APOA1P02647 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.33□□□□□ -0.11
APOA1P02647 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOA1P02647 GCLM-204ENST00000615724 3008 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
APOA1P02647 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
APOA1P02647 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOA1P02647 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
APOA1P02647 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC14.33□□□□□ -0.11
APOA1P02647 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOA1P02647 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
APOA1P02647 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
APOA1P02647 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
APOA1P02647 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.33□□□□□ -0.12
APOA1P02647 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
APOA1P02647 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
APOA1P02647 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms