Protein–RNA interactions for Protein: P01574

IFNB1, Interferon beta, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNB1P01574 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
IFNB1P01574 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFNB1P01574 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFNB1P01574 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC16.62■□□□□ 0.25
IFNB1P01574 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
IFNB1P01574 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
IFNB1P01574 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFNB1P01574 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFNB1P01574 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFNB1P01574 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
IFNB1P01574 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFNB1P01574 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC16.62■□□□□ 0.25
IFNB1P01574 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
IFNB1P01574 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC16.61■□□□□ 0.25
IFNB1P01574 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFNB1P01574 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IFNB1P01574 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFNB1P01574 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFNB1P01574 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFNB1P01574 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFNB1P01574 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFNB1P01574 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFNB1P01574 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.61■□□□□ 0.25
IFNB1P01574 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFNB1P01574 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFNB1P01574 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.61■□□□□ 0.25
IFNB1P01574 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.61■□□□□ 0.25
IFNB1P01574 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.61■□□□□ 0.25
IFNB1P01574 AC011477.6-201ENST00000604980 1927 ntBASIC16.61■□□□□ 0.25
IFNB1P01574 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.61■□□□□ 0.25
IFNB1P01574 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.61■□□□□ 0.25
IFNB1P01574 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFNB1P01574 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
IFNB1P01574 AC074386.1-202ENST00000463561 864 ntBASIC16.61■□□□□ 0.25
IFNB1P01574 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.61■□□□□ 0.25
IFNB1P01574 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.61■□□□□ 0.25
IFNB1P01574 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
IFNB1P01574 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFNB1P01574 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFNB1P01574 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFNB1P01574 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
IFNB1P01574 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.61■□□□□ 0.25
IFNB1P01574 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC16.61■□□□□ 0.25
IFNB1P01574 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
IFNB1P01574 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
IFNB1P01574 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC16.6■□□□□ 0.25
IFNB1P01574 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.6■□□□□ 0.25
IFNB1P01574 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.6■□□□□ 0.25
IFNB1P01574 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.6■□□□□ 0.25
IFNB1P01574 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.6■□□□□ 0.25
IFNB1P01574 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
IFNB1P01574 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
IFNB1P01574 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC16.6■□□□□ 0.25
IFNB1P01574 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
IFNB1P01574 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
IFNB1P01574 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC16.6■□□□□ 0.25
IFNB1P01574 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
IFNB1P01574 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.6■□□□□ 0.25
IFNB1P01574 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.6■□□□□ 0.25
IFNB1P01574 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.6■□□□□ 0.25
IFNB1P01574 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.6■□□□□ 0.25
IFNB1P01574 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.6■□□□□ 0.25
IFNB1P01574 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
IFNB1P01574 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.6■□□□□ 0.25
IFNB1P01574 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.6■□□□□ 0.25
IFNB1P01574 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.6■□□□□ 0.25
IFNB1P01574 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.6■□□□□ 0.25
IFNB1P01574 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 AL513190.1-201ENST00000621254 727 ntBASIC16.6■□□□□ 0.25
IFNB1P01574 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.6■□□□□ 0.25
IFNB1P01574 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.6■□□□□ 0.25
IFNB1P01574 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.6■□□□□ 0.25
IFNB1P01574 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC16.6■□□□□ 0.25
IFNB1P01574 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
IFNB1P01574 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.59■□□□□ 0.25
IFNB1P01574 PGR-210ENST00000619228 3038 ntTSL 5 BASIC16.59■□□□□ 0.25
IFNB1P01574 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
IFNB1P01574 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
IFNB1P01574 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
IFNB1P01574 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
IFNB1P01574 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms