Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
NKX2-2O95096 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC14.73□□□□□ -0.05
NKX2-2O95096 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
NKX2-2O95096 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC14.72□□□□□ -0.05
NKX2-2O95096 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
NKX2-2O95096 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.72□□□□□ -0.05
NKX2-2O95096 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
NKX2-2O95096 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NKX2-2O95096 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
NKX2-2O95096 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
NKX2-2O95096 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.72□□□□□ -0.05
NKX2-2O95096 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.72□□□□□ -0.05
NKX2-2O95096 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
NKX2-2O95096 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.72□□□□□ -0.05
NKX2-2O95096 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.72□□□□□ -0.05
NKX2-2O95096 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC14.72□□□□□ -0.05
NKX2-2O95096 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.72□□□□□ -0.05
NKX2-2O95096 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.72□□□□□ -0.05
NKX2-2O95096 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.72□□□□□ -0.05
NKX2-2O95096 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC14.72□□□□□ -0.05
NKX2-2O95096 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.72□□□□□ -0.05
NKX2-2O95096 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.72□□□□□ -0.05
NKX2-2O95096 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NKX2-2O95096 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
NKX2-2O95096 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.72□□□□□ -0.05
NKX2-2O95096 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
NKX2-2O95096 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.72□□□□□ -0.05
NKX2-2O95096 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.72□□□□□ -0.05
NKX2-2O95096 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
NKX2-2O95096 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX2-2O95096 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NKX2-2O95096 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX2-2O95096 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NKX2-2O95096 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX2-2O95096 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX2-2O95096 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC14.71□□□□□ -0.05
NKX2-2O95096 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC14.71□□□□□ -0.05
NKX2-2O95096 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NKX2-2O95096 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX2-2O95096 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NKX2-2O95096 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.71□□□□□ -0.05
NKX2-2O95096 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX2-2O95096 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NKX2-2O95096 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
NKX2-2O95096 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX2-2O95096 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX2-2O95096 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
NKX2-2O95096 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX2-2O95096 AC105250.1-201ENST00000509378 2057 ntBASIC14.71□□□□□ -0.05
NKX2-2O95096 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
NKX2-2O95096 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.71□□□□□ -0.05
NKX2-2O95096 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.71□□□□□ -0.05
NKX2-2O95096 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
NKX2-2O95096 HLA-V-204ENST00000476601 1289 ntBASIC14.71□□□□□ -0.05
NKX2-2O95096 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.71□□□□□ -0.05
NKX2-2O95096 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC14.71□□□□□ -0.05
NKX2-2O95096 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC14.71□□□□□ -0.05
NKX2-2O95096 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NKX2-2O95096 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC14.71□□□□□ -0.05
NKX2-2O95096 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.71□□□□□ -0.05
NKX2-2O95096 AC051619.7-201ENST00000568314 623 ntBASIC14.71□□□□□ -0.05
NKX2-2O95096 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
NKX2-2O95096 AC092850.2-201ENST00000623821 2697 ntBASIC14.71□□□□□ -0.05
NKX2-2O95096 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
NKX2-2O95096 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.71□□□□□ -0.05
NKX2-2O95096 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
NKX2-2O95096 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.71□□□□□ -0.05
NKX2-2O95096 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
NKX2-2O95096 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms