Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF4O60810 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.36■□□□□ 0.05
PRAMEF4O60810 SPDYE17-201ENST00000412399 783 ntBASIC15.36■□□□□ 0.05
PRAMEF4O60810 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.36■□□□□ 0.05
PRAMEF4O60810 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.36■□□□□ 0.05
PRAMEF4O60810 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF4O60810 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC15.36■□□□□ 0.05
PRAMEF4O60810 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
PRAMEF4O60810 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.36■□□□□ 0.05
PRAMEF4O60810 AL450472.2-201ENST00000603663 1156 ntBASIC15.36■□□□□ 0.05
PRAMEF4O60810 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC15.36■□□□□ 0.05
PRAMEF4O60810 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF4O60810 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.36■□□□□ 0.05
PRAMEF4O60810 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF4O60810 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.36■□□□□ 0.05
PRAMEF4O60810 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF4O60810 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF4O60810 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF4O60810 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PRAMEF4O60810 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.36■□□□□ 0.05
PRAMEF4O60810 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF4O60810 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF4O60810 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PRAMEF4O60810 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 PGR-210ENST00000619228 3038 ntTSL 5 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEF4O60810 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEF4O60810 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEF4O60810 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEF4O60810 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEF4O60810 AC022532.1-201ENST00000624563 1728 ntBASIC15.35■□□□□ 0.05
PRAMEF4O60810 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEF4O60810 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEF4O60810 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEF4O60810 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEF4O60810 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEF4O60810 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEF4O60810 MIR1233-2-201ENST00000408138 82 ntBASIC15.35■□□□□ 0.05
PRAMEF4O60810 MIR1233-1-201ENST00000408722 82 ntBASIC15.35■□□□□ 0.05
PRAMEF4O60810 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 SNHG9-202ENST00000564014 471 ntBASIC15.35■□□□□ 0.05
PRAMEF4O60810 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEF4O60810 MIR6080-201ENST00000617359 66 ntBASIC15.35■□□□□ 0.05
PRAMEF4O60810 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 LINC00628-201ENST00000628516 1289 ntBASIC15.35■□□□□ 0.05
PRAMEF4O60810 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEF4O60810 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEF4O60810 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEF4O60810 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEF4O60810 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEF4O60810 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEF4O60810 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEF4O60810 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PRAMEF4O60810 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PRAMEF4O60810 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.35■□□□□ 0.05
PRAMEF4O60810 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEF4O60810 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEF4O60810 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEF4O60810 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEF4O60810 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEF4O60810 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEF4O60810 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEF4O60810 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 AC069262.1-201ENST00000539058 672 ntBASIC15.34■□□□□ 0.05
PRAMEF4O60810 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 AL691403.2-201ENST00000618460 490 ntBASIC15.34■□□□□ 0.05
PRAMEF4O60810 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEF4O60810 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEF4O60810 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEF4O60810 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC15.34■□□□□ 0.05
PRAMEF4O60810 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PRAMEF4O60810 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms