Protein–RNA interactions for Protein: O43189

PHF1, PHD finger protein 1, humanhuman

Predicted RBP Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1O43189 DBET-201ENST00000630918 3363 ntBASIC13.92□□□□□ -0.18
PHF1O43189 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC13.92□□□□□ -0.18
PHF1O43189 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PHF1O43189 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF1O43189 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.92□□□□□ -0.18
PHF1O43189 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.92□□□□□ -0.18
PHF1O43189 AL671277.1-201ENST00000429656 993 ntBASIC13.92□□□□□ -0.18
PHF1O43189 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.92□□□□□ -0.18
PHF1O43189 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.92□□□□□ -0.18
PHF1O43189 KLF2P3-201ENST00000451977 1087 ntBASIC13.92□□□□□ -0.18
PHF1O43189 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
PHF1O43189 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
PHF1O43189 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC13.92□□□□□ -0.18
PHF1O43189 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC13.92□□□□□ -0.18
PHF1O43189 NOP2-220ENST00000545915 630 ntTSL 2 BASIC13.92□□□□□ -0.18
PHF1O43189 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.92□□□□□ -0.18
PHF1O43189 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.92□□□□□ -0.18
PHF1O43189 AC051619.7-201ENST00000568314 623 ntBASIC13.92□□□□□ -0.18
PHF1O43189 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PHF1O43189 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
PHF1O43189 AC099522.2-201ENST00000607001 744 ntBASIC13.92□□□□□ -0.18
PHF1O43189 AP001350.2-201ENST00000625104 1094 ntBASIC13.92□□□□□ -0.18
PHF1O43189 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
PHF1O43189 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF1O43189 AL596087.1-201ENST00000400979 1969 ntBASIC13.92□□□□□ -0.18
PHF1O43189 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF1O43189 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PHF1O43189 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.92□□□□□ -0.18
PHF1O43189 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC13.92□□□□□ -0.18
PHF1O43189 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF1O43189 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PHF1O43189 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF1O43189 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.92□□□□□ -0.18
PHF1O43189 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF1O43189 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF1O43189 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
PHF1O43189 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC13.92□□□□□ -0.18
PHF1O43189 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
PHF1O43189 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 TUBB3P1-201ENST00000405796 1332 ntBASIC13.91□□□□□ -0.18
PHF1O43189 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.91□□□□□ -0.18
PHF1O43189 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.91□□□□□ -0.18
PHF1O43189 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 VILL-207ENST00000465644 1857 ntTSL 5 BASIC13.91□□□□□ -0.18
PHF1O43189 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC13.91□□□□□ -0.18
PHF1O43189 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
PHF1O43189 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.91□□□□□ -0.18
PHF1O43189 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 AL355306.1-201ENST00000415580 579 ntBASIC13.91□□□□□ -0.18
PHF1O43189 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC13.91□□□□□ -0.18
PHF1O43189 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.91□□□□□ -0.18
PHF1O43189 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.91□□□□□ -0.18
PHF1O43189 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13.91□□□□□ -0.18
PHF1O43189 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.91□□□□□ -0.18
PHF1O43189 CR383656.12-201ENST00000549567 513 ntBASIC13.91□□□□□ -0.18
PHF1O43189 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.91□□□□□ -0.18
PHF1O43189 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.91□□□□□ -0.18
PHF1O43189 HNRNPH1-250ENST00000630639 123 ntTSL 5 BASIC13.91□□□□□ -0.18
PHF1O43189 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PHF1O43189 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.91□□□□□ -0.18
PHF1O43189 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC13.91□□□□□ -0.18
PHF1O43189 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.91□□□□□ -0.18
PHF1O43189 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
PHF1O43189 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC13.91□□□□□ -0.18
PHF1O43189 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PHF1O43189 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.91□□□□□ -0.18
PHF1O43189 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
PHF1O43189 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
PHF1O43189 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PHF1O43189 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
PHF1O43189 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms