Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC14.96□□□□□ -0.01
TRBV5-3A0A0A0MS03 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV5-3A0A0A0MS03 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV5-3A0A0A0MS03 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV5-3A0A0A0MS03 AC023024.2-201ENST00000623561 1993 ntBASIC14.96□□□□□ -0.01
TRBV5-3A0A0A0MS03 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.96□□□□□ -0.01
TRBV5-3A0A0A0MS03 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TRBV5-3A0A0A0MS03 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.96□□□□□ -0.01
TRBV5-3A0A0A0MS03 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRBV5-3A0A0A0MS03 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
TRBV5-3A0A0A0MS03 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC14.96□□□□□ -0.02
TRBV5-3A0A0A0MS03 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRBV5-3A0A0A0MS03 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
TRBV5-3A0A0A0MS03 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
TRBV5-3A0A0A0MS03 AC148477.4-201ENST00000613430 1793 ntBASIC14.96□□□□□ -0.02
TRBV5-3A0A0A0MS03 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 AC023908.3-201ENST00000564211 3047 ntBASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 MIR346-201ENST00000362234 95 ntBASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 AL135744.1-201ENST00000565098 629 ntBASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 AC092865.6-201ENST00000642101 219 ntBASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 GOLGA8DP-202ENST00000341390 2184 ntBASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRBV5-3A0A0A0MS03 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 AL390755.1-201ENST00000623716 2027 ntBASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 RER1-203ENST00000378513 3000 ntTSL 3 BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.94□□□□□ -0.02
TRBV5-3A0A0A0MS03 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRBV5-3A0A0A0MS03 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms