Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 AC007191.1-201ENST00000623179 2995 ntBASIC11.79□□□□□ -0.52
HHLA3Q9XRX5 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 BEX3-201ENST00000361298 921 ntTSL 2 BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 HCG4B-203ENST00000450128 991 ntBASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 MTRF1LP2-201ENST00000506027 1122 ntBASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 POLD4-207ENST00000531239 584 ntTSL 2 BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 AC023141.13-201ENST00000604991 943 ntBASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 AC120114.3-201ENST00000611923 658 ntBASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 ACTL9-202ENST00000612068 1252 ntBASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
HHLA3Q9XRX5 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.77□□□□□ -0.52
HHLA3Q9XRX5 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
HHLA3Q9XRX5 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
HHLA3Q9XRX5 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HHLA3Q9XRX5 AC136621.1-201ENST00000624017 2304 ntBASIC11.77□□□□□ -0.52
HHLA3Q9XRX5 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
HHLA3Q9XRX5 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HHLA3Q9XRX5 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.52
HHLA3Q9XRX5 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HHLA3Q9XRX5 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HHLA3Q9XRX5 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HHLA3Q9XRX5 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
HHLA3Q9XRX5 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.52
HHLA3Q9XRX5 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HHLA3Q9XRX5 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
HHLA3Q9XRX5 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC11.77□□□□□ -0.52
HHLA3Q9XRX5 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
HHLA3Q9XRX5 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 AC034105.1-201ENST00000563488 319 ntBASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC11.77□□□□□ -0.53
HHLA3Q9XRX5 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms