Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC17.54■□□□□ 0.4
L1RE1Q9UN81 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 CNN2P2-201ENST00000443536 909 ntBASIC17.53■□□□□ 0.4
L1RE1Q9UN81 FAM86GP-201ENST00000448322 971 ntBASIC17.53■□□□□ 0.4
L1RE1Q9UN81 CNN2P3-201ENST00000450201 906 ntBASIC17.53■□□□□ 0.4
L1RE1Q9UN81 AC098859.1-201ENST00000502915 1238 ntBASIC17.53■□□□□ 0.4
L1RE1Q9UN81 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 MIR6080-201ENST00000617359 66 ntBASIC17.53■□□□□ 0.4
L1RE1Q9UN81 AC093512.1-201ENST00000617969 520 ntBASIC17.53■□□□□ 0.4
L1RE1Q9UN81 AL136317.3-201ENST00000618497 906 ntBASIC17.53■□□□□ 0.4
L1RE1Q9UN81 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 AP002414.2-201ENST00000591780 3365 ntBASIC17.53■□□□□ 0.4
L1RE1Q9UN81 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
L1RE1Q9UN81 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
L1RE1Q9UN81 LINC01144-201ENST00000626198 1710 ntBASIC17.52■□□□□ 0.4
L1RE1Q9UN81 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
L1RE1Q9UN81 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
L1RE1Q9UN81 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
L1RE1Q9UN81 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
L1RE1Q9UN81 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.4
L1RE1Q9UN81 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
L1RE1Q9UN81 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC17.52■□□□□ 0.4
L1RE1Q9UN81 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.52■□□□□ 0.4
L1RE1Q9UN81 AC112504.1-201ENST00000623415 1841 ntBASIC17.52■□□□□ 0.4
L1RE1Q9UN81 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC17.52■□□□□ 0.4
L1RE1Q9UN81 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC17.52■□□□□ 0.4
L1RE1Q9UN81 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.52■□□□□ 0.4
L1RE1Q9UN81 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
L1RE1Q9UN81 FAM220BP-201ENST00000377689 816 ntBASIC17.52■□□□□ 0.4
L1RE1Q9UN81 HLA-H-201ENST00000383620 1096 ntBASIC17.52■□□□□ 0.4
L1RE1Q9UN81 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.52■□□□□ 0.4
L1RE1Q9UN81 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
L1RE1Q9UN81 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
L1RE1Q9UN81 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC17.52■□□□□ 0.4
L1RE1Q9UN81 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC17.52■□□□□ 0.4
L1RE1Q9UN81 AC051619.7-201ENST00000568314 623 ntBASIC17.52■□□□□ 0.4
L1RE1Q9UN81 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
L1RE1Q9UN81 AC006449.6-201ENST00000612330 2296 ntBASIC17.52■□□□□ 0.4
L1RE1Q9UN81 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
L1RE1Q9UN81 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.52■□□□□ 0.39
L1RE1Q9UN81 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
L1RE1Q9UN81 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
L1RE1Q9UN81 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.52■□□□□ 0.39
L1RE1Q9UN81 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
L1RE1Q9UN81 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms