Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 EMBP1-201ENST00000458200 901 ntBASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 UNC93B7-201ENST00000509439 705 ntBASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 AC021097.1-201ENST00000607902 574 ntBASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 AP002414.3-201ENST00000589352 1468 ntBASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 AC136621.1-201ENST00000624017 2304 ntBASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 AC006486.2-201ENST00000624246 2199 ntBASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
PCDHGB4Q9UN71 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 MYO15B-237ENST00000642007 4893 ntBASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 AC108073.2-201ENST00000464002 357 ntBASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 CIPC-205ENST00000555437 566 ntTSL 3 BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
PCDHGB4Q9UN71 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 SSR4P1-203ENST00000599569 2260 ntBASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 HNRNPDP1-201ENST00000439535 754 ntBASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 FAM185BP-201ENST00000443595 716 ntBASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 CXCL1P1-201ENST00000502804 216 ntBASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PCDHGB4Q9UN71 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms