Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 AC064862.7-201ENST00000604520 867 ntBASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 AC010654.1-201ENST00000615722 808 ntBASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 PEG13-201ENST00000631594 5667 ntBASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 AC023908.3-201ENST00000564211 3047 ntBASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 ANKH-201ENST00000284268 8203 ntAPPRIS P1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC10.8□□□□□ -0.68
SND1-IT1Q9HBX3 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 LINC01101-201ENST00000622953 1884 ntBASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 AC005089.1-201ENST00000619486 2241 ntBASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 PAWRP1-201ENST00000451083 565 ntBASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 MIR5100-201ENST00000579544 119 ntBASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 IL11-204ENST00000590625 1028 ntTSL 2 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 CYP2A7P1-201ENST00000595391 815 ntBASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 AC092329.2-201ENST00000598402 547 ntBASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 AL139424.1-201ENST00000607572 797 ntBASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 AC020765.3-201ENST00000613051 740 ntBASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 AL022326.1-202ENST00000641533 845 ntBASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 MECR-202ENST00000373791 2416 ntTSL 2 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
SND1-IT1Q9HBX3 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC10.79□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms