Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 GZMH-201ENST00000216338 909 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 ZNF343-203ENST00000381253 819 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 PRR23A-201ENST00000383163 801 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 AC098657.1-201ENST00000416270 1135 ntBASIC4.71□□□□□ -1.66
HMCN1Q96RW7 AL773545.2-201ENST00000442149 472 ntBASIC4.71□□□□□ -1.66
HMCN1Q96RW7 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 MYL6-215ENST00000549566 685 ntTSL 2 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 SNORD3B-2-202ENST00000571722 791 ntBASIC4.71□□□□□ -1.66
HMCN1Q96RW7 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 MRPS31P4-202ENST00000613769 583 ntTSL 4 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 SNX33P1-201ENST00000592116 1762 ntBASIC4.71□□□□□ -1.66
HMCN1Q96RW7 GOLGA8S-201ENST00000562295 1878 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 OS9-205ENST00000413095 1660 ntTSL 2 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 RNF181-203ENST00000441634 844 ntAPPRIS ALT1 TSL 2 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 FBXO36P1-201ENST00000579006 471 ntBASIC4.71□□□□□ -1.66
HMCN1Q96RW7 KCNQ1OT1_1.1-201ENST00000622358 464 ntBASIC4.71□□□□□ -1.66
HMCN1Q96RW7 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 RPL4P6-201ENST00000438116 1304 ntBASIC4.71□□□□□ -1.66
HMCN1Q96RW7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 IGLC1-201ENST00000390321 460 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 GGTLC4P-201ENST00000402176 664 ntBASIC4.71□□□□□ -1.66
HMCN1Q96RW7 AC091729.3-203ENST00000413706 674 ntTSL 5 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 AC027612.2-202ENST00000445955 1199 ntBASIC4.71□□□□□ -1.66
HMCN1Q96RW7 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 C1orf198-207ENST00000523410 1041 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 AC005865.2-202ENST00000635814 725 ntBASIC4.71□□□□□ -1.66
HMCN1Q96RW7 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 TUBB8P7-204ENST00000567960 1332 ntBASIC4.71□□□□□ -1.66
HMCN1Q96RW7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 AL583805.1-201ENST00000391389 531 ntBASIC4.71□□□□□ -1.66
HMCN1Q96RW7 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
HMCN1Q96RW7 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC4.71□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms