Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
GAFA1Q96PS6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
GAFA1Q96PS6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC13.29□□□□□ -0.28
GAFA1Q96PS6 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GAFA1Q96PS6 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GAFA1Q96PS6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GAFA1Q96PS6 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GAFA1Q96PS6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GAFA1Q96PS6 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.29□□□□□ -0.28
GAFA1Q96PS6 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC13.29□□□□□ -0.28
GAFA1Q96PS6 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
GAFA1Q96PS6 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC13.29□□□□□ -0.28
GAFA1Q96PS6 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
GAFA1Q96PS6 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 AP003680.1-201ENST00000598970 3660 ntBASIC13.28□□□□□ -0.28
GAFA1Q96PS6 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 FLII-221ENST00000578558 2377 ntTSL 5 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 CYMP-203ENST00000474680 1263 ntBASIC13.28□□□□□ -0.28
GAFA1Q96PS6 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 HNRNPUP1-201ENST00000554987 333 ntBASIC13.28□□□□□ -0.28
GAFA1Q96PS6 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 MIR6069-201ENST00000620069 79 ntBASIC13.28□□□□□ -0.28
GAFA1Q96PS6 AL033527.5-202ENST00000641632 1098 ntBASIC13.28□□□□□ -0.28
GAFA1Q96PS6 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.28□□□□□ -0.28
GAFA1Q96PS6 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC13.27□□□□□ -0.28
GAFA1Q96PS6 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.27□□□□□ -0.28
GAFA1Q96PS6 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.27□□□□□ -0.28
GAFA1Q96PS6 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
GAFA1Q96PS6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
GAFA1Q96PS6 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC13.27□□□□□ -0.28
GAFA1Q96PS6 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GAFA1Q96PS6 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
GAFA1Q96PS6 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GAFA1Q96PS6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
GAFA1Q96PS6 PRAL-201ENST00000624952 3286 ntBASIC13.27□□□□□ -0.28
GAFA1Q96PS6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
GAFA1Q96PS6 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
GAFA1Q96PS6 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
GAFA1Q96PS6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 KLK8-202ENST00000320838 456 ntTSL 5 BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.27□□□□□ -0.29
GAFA1Q96PS6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC13.27□□□□□ -0.29
GAFA1Q96PS6 AC055876.3-201ENST00000431496 288 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms