Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 MIR346-201ENST00000362234 95 ntBASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 AC055876.3-201ENST00000431496 288 ntBASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 SPDYE14P-201ENST00000442619 822 ntBASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 AC138649.4-201ENST00000612222 287 ntBASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
SSMEM1Q8WWF3 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 ME2P1-201ENST00000426028 1970 ntBASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 AC013467.2-201ENST00000605472 835 ntBASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.34□□□□□ -0.27
SSMEM1Q8WWF3 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC13.33□□□□□ -0.27
SSMEM1Q8WWF3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
SSMEM1Q8WWF3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC13.33□□□□□ -0.27
SSMEM1Q8WWF3 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SSMEM1Q8WWF3 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.33□□□□□ -0.27
SSMEM1Q8WWF3 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
SSMEM1Q8WWF3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
SSMEM1Q8WWF3 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms