Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 GPAA1P2-202ENST00000606848 1787 ntBASIC16.38■□□□□ 0.21
SIX5Q8N196 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIX5Q8N196 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIX5Q8N196 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIX5Q8N196 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIX5Q8N196 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.38■□□□□ 0.21
SIX5Q8N196 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIX5Q8N196 AC067852.2-201ENST00000590513 2313 ntBASIC16.38■□□□□ 0.21
SIX5Q8N196 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIX5Q8N196 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SIX5Q8N196 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
SIX5Q8N196 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIX5Q8N196 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIX5Q8N196 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC16.38■□□□□ 0.21
SIX5Q8N196 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIX5Q8N196 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIX5Q8N196 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC16.38■□□□□ 0.21
SIX5Q8N196 RPL13AP20-201ENST00000459725 609 ntBASIC16.38■□□□□ 0.21
SIX5Q8N196 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.38■□□□□ 0.21
SIX5Q8N196 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC16.38■□□□□ 0.21
SIX5Q8N196 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.38■□□□□ 0.21
SIX5Q8N196 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC16.38■□□□□ 0.21
SIX5Q8N196 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIX5Q8N196 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
SIX5Q8N196 AC091271.1-201ENST00000611877 1162 ntBASIC16.38■□□□□ 0.21
SIX5Q8N196 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.38■□□□□ 0.21
SIX5Q8N196 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIX5Q8N196 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
SIX5Q8N196 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIX5Q8N196 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.38■□□□□ 0.21
SIX5Q8N196 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIX5Q8N196 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIX5Q8N196 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
SIX5Q8N196 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIX5Q8N196 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
SIX5Q8N196 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC16.38■□□□□ 0.21
SIX5Q8N196 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.38■□□□□ 0.21
SIX5Q8N196 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC16.38■□□□□ 0.21
SIX5Q8N196 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.38■□□□□ 0.21
SIX5Q8N196 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.38■□□□□ 0.21
SIX5Q8N196 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
SIX5Q8N196 Z97205.2-201ENST00000564697 1639 ntBASIC16.37■□□□□ 0.21
SIX5Q8N196 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.37■□□□□ 0.21
SIX5Q8N196 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SIX5Q8N196 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX5Q8N196 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC16.37■□□□□ 0.21
SIX5Q8N196 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX5Q8N196 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.37■□□□□ 0.21
SIX5Q8N196 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.37■□□□□ 0.21
SIX5Q8N196 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX5Q8N196 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.37■□□□□ 0.21
SIX5Q8N196 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SIX5Q8N196 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.37■□□□□ 0.21
SIX5Q8N196 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
SIX5Q8N196 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SIX5Q8N196 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX5Q8N196 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX5Q8N196 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX5Q8N196 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX5Q8N196 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SIX5Q8N196 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.37■□□□□ 0.21
SIX5Q8N196 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.37■□□□□ 0.21
SIX5Q8N196 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SIX5Q8N196 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.37■□□□□ 0.21
SIX5Q8N196 ZNF767P-206ENST00000513792 565 ntBASIC16.37■□□□□ 0.21
SIX5Q8N196 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC16.37■□□□□ 0.21
SIX5Q8N196 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC16.37■□□□□ 0.21
SIX5Q8N196 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC16.37■□□□□ 0.21
SIX5Q8N196 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC16.37■□□□□ 0.21
SIX5Q8N196 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.37■□□□□ 0.21
SIX5Q8N196 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC16.37■□□□□ 0.21
SIX5Q8N196 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SIX5Q8N196 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
SIX5Q8N196 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX5Q8N196 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX5Q8N196 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.37■□□□□ 0.21
SIX5Q8N196 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX5Q8N196 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
SIX5Q8N196 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
SIX5Q8N196 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.37■□□□□ 0.21
SIX5Q8N196 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.36■□□□□ 0.21
SIX5Q8N196 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
SIX5Q8N196 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.36■□□□□ 0.21
SIX5Q8N196 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.36■□□□□ 0.21
SIX5Q8N196 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
SIX5Q8N196 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
SIX5Q8N196 AL391256.1-201ENST00000443260 1855 ntBASIC16.36■□□□□ 0.21
SIX5Q8N196 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
SIX5Q8N196 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.36■□□□□ 0.21
SIX5Q8N196 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.36■□□□□ 0.21
SIX5Q8N196 ZBTB12BP-201ENST00000314232 1122 ntBASIC16.36■□□□□ 0.21
SIX5Q8N196 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms