Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CROCCP3Q8IVE0 ACP7-201ENST00000331256 2966 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
CROCCP3Q8IVE0 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.07
CROCCP3Q8IVE0 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CROCCP3Q8IVE0 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.07
CROCCP3Q8IVE0 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.58□□□□□ -0.07
CROCCP3Q8IVE0 LINC01144-201ENST00000626198 1710 ntBASIC14.58□□□□□ -0.07
CROCCP3Q8IVE0 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.58□□□□□ -0.07
CROCCP3Q8IVE0 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CROCCP3Q8IVE0 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
CROCCP3Q8IVE0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 AC098590.1-201ENST00000468126 897 ntBASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 HAL-202ENST00000538703 2637 ntTSL 2 BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CROCCP3Q8IVE0 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 AC092135.3-201ENST00000624151 1846 ntBASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 AL158047.1-201ENST00000445918 881 ntBASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 AD001527.2-201ENST00000622994 785 ntBASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
CROCCP3Q8IVE0 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms