Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LRRTM1Q86UE6 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRTM1Q86UE6 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC13.96□□□□□ -0.18
LRRTM1Q86UE6 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRTM1Q86UE6 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRTM1Q86UE6 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
LRRTM1Q86UE6 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC13.96□□□□□ -0.18
LRRTM1Q86UE6 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.96□□□□□ -0.18
LRRTM1Q86UE6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
LRRTM1Q86UE6 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 CELP-203ENST00000624767 2414 ntTSL 5 BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 SNX18-202ENST00000343017 3140 ntBASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 CICP23-201ENST00000605013 2741 ntBASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 CXCL1P1-201ENST00000502804 216 ntBASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 AC008735.5-201ENST00000623544 497 ntBASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 AC023908.3-201ENST00000564211 3047 ntBASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 AL589702.1-201ENST00000641229 1509 ntBASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
LRRTM1Q86UE6 AC007292.2-201ENST00000593524 1812 ntBASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 LRRFIP1P1-201ENST00000498774 2246 ntBASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 GPX1P2-201ENST00000429271 606 ntBASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 CLEC4GP1-201ENST00000596555 870 ntBASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 ILF3-AS1-201ENST00000591501 1983 ntBASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
LRRTM1Q86UE6 KRT8P44-201ENST00000441609 1350 ntBASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms