Protein–RNA interactions for Protein: Q08554

DSC1, Desmocollin-1, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DSC1Q08554 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
DSC1Q08554 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DSC1Q08554 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
DSC1Q08554 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DSC1Q08554 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
DSC1Q08554 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DSC1Q08554 AC005229.1-201ENST00000392885 409 ntBASIC16.86■□□□□ 0.29
DSC1Q08554 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.86■□□□□ 0.29
DSC1Q08554 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.86■□□□□ 0.29
DSC1Q08554 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC16.86■□□□□ 0.29
DSC1Q08554 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC16.86■□□□□ 0.29
DSC1Q08554 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
DSC1Q08554 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DSC1Q08554 AC026410.3-201ENST00000514280 936 ntBASIC16.86■□□□□ 0.29
DSC1Q08554 AC068587.3-201ENST00000526613 355 ntBASIC16.86■□□□□ 0.29
DSC1Q08554 MIR4313-201ENST00000580760 101 ntBASIC16.86■□□□□ 0.29
DSC1Q08554 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.86■□□□□ 0.29
DSC1Q08554 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.86■□□□□ 0.29
DSC1Q08554 AC133552.6-201ENST00000613406 534 ntBASIC16.86■□□□□ 0.29
DSC1Q08554 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC16.86■□□□□ 0.29
DSC1Q08554 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.86■□□□□ 0.29
DSC1Q08554 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
DSC1Q08554 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DSC1Q08554 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
DSC1Q08554 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DSC1Q08554 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DSC1Q08554 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
DSC1Q08554 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
DSC1Q08554 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
DSC1Q08554 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
DSC1Q08554 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
DSC1Q08554 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
DSC1Q08554 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
DSC1Q08554 PDIA3P1-201ENST00000471856 1510 ntBASIC16.86■□□□□ 0.29
DSC1Q08554 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
DSC1Q08554 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
DSC1Q08554 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC16.85■□□□□ 0.29
DSC1Q08554 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.85■□□□□ 0.29
DSC1Q08554 PCDHA14-201ENST00000506751 2298 ntBASIC16.85■□□□□ 0.29
DSC1Q08554 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.85■□□□□ 0.29
DSC1Q08554 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 AL133267.1-201ENST00000398220 340 ntBASIC16.85■□□□□ 0.29
DSC1Q08554 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.85■□□□□ 0.29
DSC1Q08554 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC16.85■□□□□ 0.29
DSC1Q08554 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.85■□□□□ 0.29
DSC1Q08554 AC104989.1-201ENST00000519711 778 ntBASIC16.85■□□□□ 0.29
DSC1Q08554 AP001889.1-201ENST00000525414 633 ntBASIC16.85■□□□□ 0.29
DSC1Q08554 PTP4A1P2-201ENST00000546033 454 ntBASIC16.85■□□□□ 0.29
DSC1Q08554 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC16.85■□□□□ 0.29
DSC1Q08554 AL022328.1-201ENST00000610050 478 ntBASIC16.85■□□□□ 0.29
DSC1Q08554 AC005252.2-201ENST00000624630 1141 ntBASIC16.85■□□□□ 0.29
DSC1Q08554 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
DSC1Q08554 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.85■□□□□ 0.29
DSC1Q08554 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.85■□□□□ 0.29
DSC1Q08554 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
DSC1Q08554 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.85■□□□□ 0.29
DSC1Q08554 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
DSC1Q08554 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
DSC1Q08554 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
DSC1Q08554 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
DSC1Q08554 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
DSC1Q08554 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC16.84■□□□□ 0.29
DSC1Q08554 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.84■□□□□ 0.29
DSC1Q08554 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
DSC1Q08554 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.84■□□□□ 0.29
DSC1Q08554 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.84■□□□□ 0.29
DSC1Q08554 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
DSC1Q08554 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.84■□□□□ 0.29
DSC1Q08554 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
DSC1Q08554 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
DSC1Q08554 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
DSC1Q08554 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.84■□□□□ 0.29
DSC1Q08554 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
DSC1Q08554 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC16.84■□□□□ 0.29
DSC1Q08554 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
DSC1Q08554 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC16.84■□□□□ 0.29
DSC1Q08554 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
DSC1Q08554 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.84■□□□□ 0.29
DSC1Q08554 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
DSC1Q08554 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
DSC1Q08554 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms