Protein–RNA interactions for Protein: P49450

CENPA, Histone H3-like centromeric protein A, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPAP49450 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
CENPAP49450 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 AC009947.1-201ENST00000444350 727 ntBASIC14.62□□□□□ -0.07
CENPAP49450 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC14.62□□□□□ -0.07
CENPAP49450 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.62□□□□□ -0.07
CENPAP49450 AC079776.4-201ENST00000511039 504 ntBASIC14.62□□□□□ -0.07
CENPAP49450 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC14.62□□□□□ -0.07
CENPAP49450 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC14.62□□□□□ -0.07
CENPAP49450 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.62□□□□□ -0.07
CENPAP49450 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC14.62□□□□□ -0.07
CENPAP49450 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC14.62□□□□□ -0.07
CENPAP49450 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
CENPAP49450 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CENPAP49450 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.62□□□□□ -0.07
CENPAP49450 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CENPAP49450 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC14.62□□□□□ -0.07
CENPAP49450 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CENPAP49450 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CENPAP49450 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC14.62□□□□□ -0.07
CENPAP49450 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CENPAP49450 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
CENPAP49450 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.61□□□□□ -0.07
CENPAP49450 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC14.61□□□□□ -0.07
CENPAP49450 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC14.61□□□□□ -0.07
CENPAP49450 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.61□□□□□ -0.07
CENPAP49450 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
CENPAP49450 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.61□□□□□ -0.07
CENPAP49450 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CENPAP49450 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CENPAP49450 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC14.61□□□□□ -0.07
CENPAP49450 AL662844.1-201ENST00000546340 181 ntBASIC14.61□□□□□ -0.07
CENPAP49450 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CENPAP49450 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC14.61□□□□□ -0.07
CENPAP49450 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.61□□□□□ -0.07
CENPAP49450 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.61□□□□□ -0.07
CENPAP49450 AC104692.2-201ENST00000603054 253 ntBASIC14.61□□□□□ -0.07
CENPAP49450 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC14.61□□□□□ -0.07
CENPAP49450 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC14.61□□□□□ -0.07
CENPAP49450 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CENPAP49450 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC14.61□□□□□ -0.07
CENPAP49450 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CENPAP49450 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.61□□□□□ -0.07
CENPAP49450 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
CENPAP49450 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CENPAP49450 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.61□□□□□ -0.07
CENPAP49450 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC14.61□□□□□ -0.07
CENPAP49450 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CENPAP49450 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.6□□□□□ -0.07
CENPAP49450 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.6□□□□□ -0.07
CENPAP49450 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CENPAP49450 AC105917.1-201ENST00000506637 2539 ntBASIC14.6□□□□□ -0.07
CENPAP49450 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms