Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 BNIP3P1-202ENST00000550043 1585 ntBASIC14.51□□□□□ -0.09
GDF1P27539 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
GDF1P27539 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.51□□□□□ -0.09
GDF1P27539 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
GDF1P27539 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GDF1P27539 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GDF1P27539 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.51□□□□□ -0.09
GDF1P27539 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GDF1P27539 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
GDF1P27539 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GDF1P27539 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.51□□□□□ -0.09
GDF1P27539 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GDF1P27539 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.51□□□□□ -0.09
GDF1P27539 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GDF1P27539 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GDF1P27539 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GDF1P27539 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GDF1P27539 MIR648-201ENST00000385046 94 ntBASIC14.51□□□□□ -0.09
GDF1P27539 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GDF1P27539 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GDF1P27539 PIN1P1-201ENST00000412108 996 ntBASIC14.51□□□□□ -0.09
GDF1P27539 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.51□□□□□ -0.09
GDF1P27539 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.51□□□□□ -0.09
GDF1P27539 SPTLC1P1-201ENST00000447199 261 ntBASIC14.51□□□□□ -0.09
GDF1P27539 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC14.51□□□□□ -0.09
GDF1P27539 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.51□□□□□ -0.09
GDF1P27539 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GDF1P27539 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.51□□□□□ -0.09
GDF1P27539 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.51□□□□□ -0.09
GDF1P27539 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
GDF1P27539 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
GDF1P27539 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
GDF1P27539 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
GDF1P27539 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
GDF1P27539 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GDF1P27539 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.51□□□□□ -0.09
GDF1P27539 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.51□□□□□ -0.09
GDF1P27539 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC14.51□□□□□ -0.09
GDF1P27539 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
GDF1P27539 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GDF1P27539 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
GDF1P27539 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
GDF1P27539 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GDF1P27539 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC14.5□□□□□ -0.09
GDF1P27539 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC14.5□□□□□ -0.09
GDF1P27539 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GDF1P27539 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.5□□□□□ -0.09
GDF1P27539 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GDF1P27539 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GDF1P27539 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GDF1P27539 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GDF1P27539 PGR-209ENST00000617858 2816 ntTSL 5 BASIC14.5□□□□□ -0.09
GDF1P27539 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
GDF1P27539 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
GDF1P27539 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GDF1P27539 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GDF1P27539 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.5□□□□□ -0.09
GDF1P27539 OSM-203ENST00000403463 464 ntTSL 3 BASIC14.5□□□□□ -0.09
GDF1P27539 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
GDF1P27539 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC14.5□□□□□ -0.09
GDF1P27539 TAF8-206ENST00000472818 719 ntTSL 2 BASIC14.5□□□□□ -0.09
GDF1P27539 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.5□□□□□ -0.09
GDF1P27539 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC14.5□□□□□ -0.09
GDF1P27539 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.5□□□□□ -0.09
GDF1P27539 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.5□□□□□ -0.09
GDF1P27539 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
GDF1P27539 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.5□□□□□ -0.09
GDF1P27539 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.5□□□□□ -0.09
GDF1P27539 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GDF1P27539 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
GDF1P27539 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.5□□□□□ -0.09
GDF1P27539 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GDF1P27539 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GDF1P27539 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GDF1P27539 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC14.5□□□□□ -0.09
GDF1P27539 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
GDF1P27539 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
GDF1P27539 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC14.5□□□□□ -0.09
GDF1P27539 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GDF1P27539 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
GDF1P27539 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
GDF1P27539 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDF1P27539 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
GDF1P27539 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC14.49□□□□□ -0.09
GDF1P27539 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
GDF1P27539 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.49□□□□□ -0.09
GDF1P27539 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.49□□□□□ -0.09
GDF1P27539 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
GDF1P27539 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDF1P27539 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
GDF1P27539 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
GDF1P27539 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.49□□□□□ -0.09
GDF1P27539 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
GDF1P27539 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.49□□□□□ -0.09
GDF1P27539 PCDH8P1-201ENST00000428983 2773 ntBASIC14.49□□□□□ -0.09
GDF1P27539 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDF1P27539 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
GDF1P27539 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.49□□□□□ -0.09
GDF1P27539 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC14.49□□□□□ -0.09
GDF1P27539 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms