Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC16.18■□□□□ 0.18
HLA-DPA1P20036 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC16.18■□□□□ 0.18
HLA-DPA1P20036 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DPA1P20036 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC16.18■□□□□ 0.18
HLA-DPA1P20036 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DPA1P20036 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.18■□□□□ 0.18
HLA-DPA1P20036 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
HLA-DPA1P20036 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
HLA-DPA1P20036 COQ9-214ENST00000567933 882 ntTSL 3 BASIC16.18■□□□□ 0.18
HLA-DPA1P20036 AC105021.1-202ENST00000570572 669 ntBASIC16.18■□□□□ 0.18
HLA-DPA1P20036 AC003101.2-201ENST00000612557 442 ntBASIC16.18■□□□□ 0.18
HLA-DPA1P20036 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPA1P20036 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.18■□□□□ 0.18
HLA-DPA1P20036 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.18■□□□□ 0.18
HLA-DPA1P20036 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPA1P20036 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
HLA-DPA1P20036 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPA1P20036 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
HLA-DPA1P20036 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.18■□□□□ 0.18
HLA-DPA1P20036 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
HLA-DPA1P20036 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 AL035456.1-201ENST00000456064 1369 ntBASIC16.17■□□□□ 0.18
HLA-DPA1P20036 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 EEF1DP4-201ENST00000446006 880 ntBASIC16.17■□□□□ 0.18
HLA-DPA1P20036 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 HLA-J-203ENST00000494367 1087 ntBASIC16.17■□□□□ 0.18
HLA-DPA1P20036 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 MIR6080-201ENST00000617359 66 ntBASIC16.17■□□□□ 0.18
HLA-DPA1P20036 LINC00628-201ENST00000628516 1289 ntBASIC16.17■□□□□ 0.18
HLA-DPA1P20036 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
HLA-DPA1P20036 AC008741.2-201ENST00000612792 3115 ntBASIC16.17■□□□□ 0.18
HLA-DPA1P20036 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 BANF1P1-201ENST00000553684 263 ntBASIC16.16■□□□□ 0.18
HLA-DPA1P20036 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 LITAF-210ENST00000571976 548 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 LITAF-214ENST00000574703 486 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
HLA-DPA1P20036 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms