Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 AC005089.1-201ENST00000619486 2241 ntBASIC12.03□□□□□ -0.48
SMIM17P0DL12 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
SMIM17P0DL12 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 AC016734.2-201ENST00000624325 1377 ntBASIC12.03□□□□□ -0.48
SMIM17P0DL12 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC12.03□□□□□ -0.48
SMIM17P0DL12 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.02□□□□□ -0.48
SMIM17P0DL12 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SMIM17P0DL12 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC12.02□□□□□ -0.48
SMIM17P0DL12 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
SMIM17P0DL12 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SMIM17P0DL12 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
SMIM17P0DL12 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
SMIM17P0DL12 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
SMIM17P0DL12 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SMIM17P0DL12 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SMIM17P0DL12 PPP1R26P4-201ENST00000619065 3527 ntBASIC12.02□□□□□ -0.48
SMIM17P0DL12 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
SMIM17P0DL12 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SMIM17P0DL12 NUP133-201ENST00000261396 5207 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SMIM17P0DL12 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
SMIM17P0DL12 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
SMIM17P0DL12 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.48
SMIM17P0DL12 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 REXO1L1P-201ENST00000379010 6598 ntBASIC12.02□□□□□ -0.49
SMIM17P0DL12 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM17P0DL12 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM17P0DL12 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM17P0DL12 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 STARD13-205ENST00000439831 945 ntTSL 2 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM17P0DL12 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 CYB561-217ENST00000582997 877 ntTSL 5 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 AC073592.4-201ENST00000623827 446 ntBASIC12.02□□□□□ -0.49
SMIM17P0DL12 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM17P0DL12 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM17P0DL12 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM17P0DL12 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM17P0DL12 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM17P0DL12 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM17P0DL12 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM17P0DL12 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 AP000487.1-202ENST00000500185 2602 ntTSL 2 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM17P0DL12 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM17P0DL12 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM17P0DL12 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
SMIM17P0DL12 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.02□□□□□ -0.49
SMIM17P0DL12 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
SMIM17P0DL12 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC12.01□□□□□ -0.49
SMIM17P0DL12 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM17P0DL12 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM17P0DL12 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM17P0DL12 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC12.01□□□□□ -0.49
SMIM17P0DL12 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM17P0DL12 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM17P0DL12 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM17P0DL12 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM17P0DL12 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC12.01□□□□□ -0.49
SMIM17P0DL12 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM17P0DL12 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM17P0DL12 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM17P0DL12 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM17P0DL12 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
SMIM17P0DL12 AL512652.2-201ENST00000625156 1716 ntBASIC12.01□□□□□ -0.49
SMIM17P0DL12 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.01□□□□□ -0.49
SMIM17P0DL12 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC12.01□□□□□ -0.49
SMIM17P0DL12 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC12.01□□□□□ -0.49
SMIM17P0DL12 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM17P0DL12 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM17P0DL12 GPAA1P2-202ENST00000606848 1787 ntBASIC12.01□□□□□ -0.49
SMIM17P0DL12 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM17P0DL12 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
SMIM17P0DL12 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms