Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PPP1R3DO95685 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PPP1R3DO95685 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
PPP1R3DO95685 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP1R3DO95685 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP1R3DO95685 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
PPP1R3DO95685 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.53□□□□□ -0.08
PPP1R3DO95685 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP1R3DO95685 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
PPP1R3DO95685 RSRP1-202ENST00000431849 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP1R3DO95685 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
PPP1R3DO95685 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
PPP1R3DO95685 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PPP1R3DO95685 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
PPP1R3DO95685 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.52□□□□□ -0.08
PPP1R3DO95685 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PPP1R3DO95685 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PPP1R3DO95685 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PPP1R3DO95685 AP001282.1-201ENST00000531301 1499 ntBASIC14.52□□□□□ -0.08
PPP1R3DO95685 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
PPP1R3DO95685 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
PPP1R3DO95685 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
PPP1R3DO95685 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC14.52□□□□□ -0.08
PPP1R3DO95685 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
PPP1R3DO95685 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC14.52□□□□□ -0.08
PPP1R3DO95685 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.52□□□□□ -0.08
PPP1R3DO95685 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP1R3DO95685 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
PPP1R3DO95685 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP1R3DO95685 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
PPP1R3DO95685 KRT18P2-201ENST00000447938 1258 ntBASIC14.52□□□□□ -0.09
PPP1R3DO95685 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.52□□□□□ -0.09
PPP1R3DO95685 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.52□□□□□ -0.09
PPP1R3DO95685 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC14.52□□□□□ -0.09
PPP1R3DO95685 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC14.52□□□□□ -0.09
PPP1R3DO95685 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.52□□□□□ -0.09
PPP1R3DO95685 AC034105.1-201ENST00000563488 319 ntBASIC14.52□□□□□ -0.09
PPP1R3DO95685 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC14.52□□□□□ -0.09
PPP1R3DO95685 AC068137.2-201ENST00000605408 478 ntBASIC14.52□□□□□ -0.09
PPP1R3DO95685 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP1R3DO95685 AL161645.1-201ENST00000622716 1255 ntBASIC14.52□□□□□ -0.09
PPP1R3DO95685 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
PPP1R3DO95685 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP1R3DO95685 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
PPP1R3DO95685 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP1R3DO95685 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP1R3DO95685 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP1R3DO95685 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PPP1R3DO95685 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC14.52□□□□□ -0.09
PPP1R3DO95685 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.52□□□□□ -0.09
PPP1R3DO95685 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP1R3DO95685 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
PPP1R3DO95685 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC14.52□□□□□ -0.09
PPP1R3DO95685 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.52□□□□□ -0.09
PPP1R3DO95685 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP1R3DO95685 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
PPP1R3DO95685 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
PPP1R3DO95685 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PPP1R3DO95685 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PPP1R3DO95685 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC14.51□□□□□ -0.09
PPP1R3DO95685 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.51□□□□□ -0.09
PPP1R3DO95685 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.51□□□□□ -0.09
PPP1R3DO95685 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.51□□□□□ -0.09
PPP1R3DO95685 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PPP1R3DO95685 C18orf25-203ENST00000615052 5462 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PPP1R3DO95685 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
PPP1R3DO95685 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PPP1R3DO95685 GPX1P2-201ENST00000429271 606 ntBASIC14.51□□□□□ -0.09
PPP1R3DO95685 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PPP1R3DO95685 SMN2-210ENST00000511812 867 ntTSL 2 BASIC14.51□□□□□ -0.09
PPP1R3DO95685 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.51□□□□□ -0.09
PPP1R3DO95685 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.51□□□□□ -0.09
PPP1R3DO95685 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.51□□□□□ -0.09
PPP1R3DO95685 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PPP1R3DO95685 MAPT-204ENST00000344290 6816 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
PPP1R3DO95685 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PPP1R3DO95685 TMBIM7P-203ENST00000641617 1718 ntBASIC14.51□□□□□ -0.09
PPP1R3DO95685 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PPP1R3DO95685 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PPP1R3DO95685 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
PPP1R3DO95685 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
PPP1R3DO95685 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PPP1R3DO95685 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
PPP1R3DO95685 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
PPP1R3DO95685 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.51□□□□□ -0.09
PPP1R3DO95685 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
PPP1R3DO95685 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PPP1R3DO95685 AC087481.3-201ENST00000602886 1894 ntBASIC14.5□□□□□ -0.09
PPP1R3DO95685 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PPP1R3DO95685 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.5□□□□□ -0.09
PPP1R3DO95685 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
PPP1R3DO95685 C15orf52-202ENST00000397536 4717 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PPP1R3DO95685 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PPP1R3DO95685 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
PPP1R3DO95685 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PPP1R3DO95685 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC14.5□□□□□ -0.09
PPP1R3DO95685 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
PPP1R3DO95685 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
PPP1R3DO95685 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.5□□□□□ -0.09
PPP1R3DO95685 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms