Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
ZNF253O75346 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC12.57□□□□□ -0.4
ZNF253O75346 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 REXO1L8P-201ENST00000604378 1897 ntBASIC12.57□□□□□ -0.4
ZNF253O75346 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
ZNF253O75346 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF253O75346 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
ZNF253O75346 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.57□□□□□ -0.4
ZNF253O75346 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC12.56□□□□□ -0.4
ZNF253O75346 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.56□□□□□ -0.4
ZNF253O75346 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ZNF253O75346 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 AC007292.2-201ENST00000593524 1812 ntBASIC12.56□□□□□ -0.4
ZNF253O75346 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 ARMC10P1-201ENST00000313754 855 ntBASIC12.56□□□□□ -0.4
ZNF253O75346 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC12.56□□□□□ -0.4
ZNF253O75346 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC12.56□□□□□ -0.4
ZNF253O75346 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
ZNF253O75346 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
ZNF253O75346 FOSL1P1-201ENST00000511041 816 ntBASIC12.56□□□□□ -0.4
ZNF253O75346 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC12.56□□□□□ -0.4
ZNF253O75346 TPM1-218ENST00000559281 851 ntTSL 5 BASIC12.56□□□□□ -0.4
ZNF253O75346 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC12.56□□□□□ -0.4
ZNF253O75346 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC12.56□□□□□ -0.4
ZNF253O75346 AC008608.2-201ENST00000606089 416 ntBASIC12.56□□□□□ -0.4
ZNF253O75346 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC12.56□□□□□ -0.4
ZNF253O75346 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ZNF253O75346 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.56□□□□□ -0.4
ZNF253O75346 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC12.56□□□□□ -0.4
ZNF253O75346 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
ZNF253O75346 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ZNF253O75346 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF253O75346 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ZNF253O75346 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ZNF253O75346 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ZNF253O75346 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
ZNF253O75346 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC12.55□□□□□ -0.4
ZNF253O75346 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 LSM5-204ENST00000409909 740 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF253O75346 ELK2BP-201ENST00000415014 1224 ntBASIC12.55□□□□□ -0.4
ZNF253O75346 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF253O75346 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC12.55□□□□□ -0.4
ZNF253O75346 SART3-203ENST00000546611 1184 ntBASIC12.55□□□□□ -0.4
ZNF253O75346 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC12.55□□□□□ -0.4
ZNF253O75346 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC12.55□□□□□ -0.4
ZNF253O75346 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC12.55□□□□□ -0.4
ZNF253O75346 IRF8-202ENST00000562492 946 ntTSL 3 BASIC12.55□□□□□ -0.4
ZNF253O75346 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.55□□□□□ -0.4
ZNF253O75346 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC12.55□□□□□ -0.4
ZNF253O75346 AL732292.2-201ENST00000609649 430 ntBASIC12.55□□□□□ -0.4
ZNF253O75346 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC12.55□□□□□ -0.4
ZNF253O75346 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ZNF253O75346 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ZNF253O75346 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
ZNF253O75346 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.55□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms