Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 AP001160.2-201ENST00000596071 487 ntBASIC14.28□□□□□ -0.12
TRAF3IP2O43734 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 AC132872.4-202ENST00000622924 2756 ntBASIC14.28□□□□□ -0.12
TRAF3IP2O43734 LINC00628-201ENST00000628516 1289 ntBASIC14.28□□□□□ -0.12
TRAF3IP2O43734 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
TRAF3IP2O43734 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAF3IP2O43734 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAF3IP2O43734 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAF3IP2O43734 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAF3IP2O43734 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.27□□□□□ -0.12
TRAF3IP2O43734 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAF3IP2O43734 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRAF3IP2O43734 REXO1L1P-202ENST00000608646 1974 ntBASIC14.27□□□□□ -0.12
TRAF3IP2O43734 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC14.27□□□□□ -0.12
TRAF3IP2O43734 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAF3IP2O43734 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.27□□□□□ -0.12
TRAF3IP2O43734 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRAF3IP2O43734 PRAL-201ENST00000624952 3286 ntBASIC14.27□□□□□ -0.12
TRAF3IP2O43734 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
TRAF3IP2O43734 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAF3IP2O43734 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TRAF3IP2O43734 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.27□□□□□ -0.12
TRAF3IP2O43734 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
TRAF3IP2O43734 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.27□□□□□ -0.12
TRAF3IP2O43734 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TRAF3IP2O43734 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14.27□□□□□ -0.12
TRAF3IP2O43734 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 AC109322.1-201ENST00000524499 1264 ntBASIC14.27□□□□□ -0.13
TRAF3IP2O43734 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 MIR4453-201ENST00000584019 89 ntBASIC14.27□□□□□ -0.13
TRAF3IP2O43734 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRAF3IP2O43734 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 AC126755.1-201ENST00000525846 6405 ntBASIC14.26□□□□□ -0.13
TRAF3IP2O43734 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 KRT8P37-201ENST00000451609 1420 ntBASIC14.26□□□□□ -0.13
TRAF3IP2O43734 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 AC069262.1-201ENST00000539058 672 ntBASIC14.26□□□□□ -0.13
TRAF3IP2O43734 LITAF-210ENST00000571976 548 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 LITAF-214ENST00000574703 486 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 AL133215.2-201ENST00000609242 977 ntBASIC14.26□□□□□ -0.13
TRAF3IP2O43734 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 AP003680.1-201ENST00000598970 3660 ntBASIC14.26□□□□□ -0.13
TRAF3IP2O43734 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TRAF3IP2O43734 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms