Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
PCDH17O14917 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
PCDH17O14917 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
PCDH17O14917 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
PCDH17O14917 AC055876.3-201ENST00000431496 288 ntBASIC15.35■□□□□ 0.05
PCDH17O14917 AC093724.1-201ENST00000448659 1027 ntBASIC15.35■□□□□ 0.05
PCDH17O14917 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDH17O14917 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC15.35■□□□□ 0.05
PCDH17O14917 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDH17O14917 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDH17O14917 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 AC138649.4-201ENST00000612222 287 ntBASIC15.35■□□□□ 0.05
PCDH17O14917 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDH17O14917 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PCDH17O14917 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDH17O14917 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDH17O14917 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PCDH17O14917 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PCDH17O14917 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDH17O14917 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 OVCH1-AS1-204ENST00000641955 5529 ntBASIC15.35■□□□□ 0.05
PCDH17O14917 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PCDH17O14917 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDH17O14917 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDH17O14917 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDH17O14917 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PCDH17O14917 LINC01144-201ENST00000626198 1710 ntBASIC15.34■□□□□ 0.05
PCDH17O14917 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH17O14917 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDH17O14917 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PCDH17O14917 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH17O14917 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDH17O14917 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDH17O14917 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH17O14917 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDH17O14917 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
PCDH17O14917 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH17O14917 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH17O14917 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH17O14917 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH17O14917 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
PCDH17O14917 CD81-202ENST00000381036 880 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDH17O14917 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH17O14917 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PCDH17O14917 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDH17O14917 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDH17O14917 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDH17O14917 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDH17O14917 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDH17O14917 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.34■□□□□ 0.05
PCDH17O14917 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDH17O14917 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDH17O14917 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC15.34■□□□□ 0.05
PCDH17O14917 MIR4745-201ENST00000577608 62 ntBASIC15.34■□□□□ 0.05
PCDH17O14917 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.34■□□□□ 0.05
PCDH17O14917 AJ011932.1-201ENST00000621707 465 ntBASIC15.34■□□□□ 0.05
PCDH17O14917 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH17O14917 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH17O14917 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH17O14917 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC15.34■□□□□ 0.05
PCDH17O14917 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH17O14917 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH17O14917 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.34■□□□□ 0.05
PCDH17O14917 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH17O14917 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH17O14917 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH17O14917 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH17O14917 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
PCDH17O14917 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH17O14917 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.34■□□□□ 0.05
PCDH17O14917 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH17O14917 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PCDH17O14917 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
PCDH17O14917 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.33■□□□□ 0.05
PCDH17O14917 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
PCDH17O14917 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDH17O14917 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PCDH17O14917 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDH17O14917 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDH17O14917 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDH17O14917 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDH17O14917 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
PCDH17O14917 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms