Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 LRRFIP1P1-201ENST00000498774 2246 ntBASIC16.17■□□□□ 0.18
PCDHGC4Q9Y5F7 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 AC241585.1-201ENST00000433527 519 ntBASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
PCDHGC4Q9Y5F7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 HIST3H2BA-201ENST00000436555 524 ntBASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 FXR1-221ENST00000491674 365 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 AC011477.6-201ENST00000604980 1927 ntBASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC16.15■□□□□ 0.18
PCDHGC4Q9Y5F7 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC16.14■□□□□ 0.18
PCDHGC4Q9Y5F7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.14■□□□□ 0.18
PCDHGC4Q9Y5F7 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.14■□□□□ 0.17
PCDHGC4Q9Y5F7 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.14■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms