Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHB1Q9Y5F3 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 AP001282.1-201ENST00000531301 1499 ntBASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 HLA-H-201ENST00000383620 1096 ntBASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 AL596325.1-201ENST00000563991 1082 ntBASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 AC061975.2-201ENST00000581722 295 ntBASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 AL590560.3-201ENST00000623350 461 ntBASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHB1Q9Y5F3 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 TSSK5P-201ENST00000423978 907 ntBASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 NME2P1-201ENST00000426182 414 ntBASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 CR383656.12-201ENST00000549567 513 ntBASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 AC009118.2-201ENST00000613275 655 ntBASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 LINC02199-201ENST00000506655 2702 ntBASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 AC010491.1-201ENST00000563101 2797 ntBASIC16.03■□□□□ 0.16
PCDHB1Q9Y5F3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.02■□□□□ 0.16
PCDHB1Q9Y5F3 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms