Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.91■□□□□ 0.3
TLR9Q9NR96 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TLR9Q9NR96 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TLR9Q9NR96 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
TLR9Q9NR96 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
TLR9Q9NR96 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
TLR9Q9NR96 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
TLR9Q9NR96 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TLR9Q9NR96 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TLR9Q9NR96 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TLR9Q9NR96 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TLR9Q9NR96 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TLR9Q9NR96 TP73-213ENST00000604479 1623 ntTSL 5 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TLR9Q9NR96 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
TLR9Q9NR96 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 TPI1-206ENST00000488464 791 ntTSL 5 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TLR9Q9NR96 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TLR9Q9NR96 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TLR9Q9NR96 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TLR9Q9NR96 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.9■□□□□ 0.3
TLR9Q9NR96 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
TLR9Q9NR96 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
TLR9Q9NR96 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
TLR9Q9NR96 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
TLR9Q9NR96 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
TLR9Q9NR96 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
TLR9Q9NR96 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
TLR9Q9NR96 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.89■□□□□ 0.29
TLR9Q9NR96 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.89■□□□□ 0.29
TLR9Q9NR96 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
TLR9Q9NR96 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
TLR9Q9NR96 TOMM22P5-201ENST00000416399 439 ntBASIC16.89■□□□□ 0.29
TLR9Q9NR96 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 AC007551.1-201ENST00000457394 519 ntBASIC16.89■□□□□ 0.29
TLR9Q9NR96 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.89■□□□□ 0.29
TLR9Q9NR96 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC16.89■□□□□ 0.29
TLR9Q9NR96 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC16.89■□□□□ 0.29
TLR9Q9NR96 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC16.89■□□□□ 0.29
TLR9Q9NR96 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 AGER-214ENST00000538695 487 ntTSL 2 BASIC16.89■□□□□ 0.29
TLR9Q9NR96 AP000812.2-201ENST00000538934 718 ntBASIC16.89■□□□□ 0.29
TLR9Q9NR96 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.89■□□□□ 0.29
TLR9Q9NR96 AC009486.1-201ENST00000569860 813 ntBASIC16.89■□□□□ 0.29
TLR9Q9NR96 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
TLR9Q9NR96 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.89■□□□□ 0.29
TLR9Q9NR96 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
TLR9Q9NR96 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 AL592424.1-201ENST00000563624 1536 ntBASIC16.89■□□□□ 0.29
TLR9Q9NR96 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 AC079328.2-201ENST00000561241 3354 ntBASIC16.89■□□□□ 0.29
TLR9Q9NR96 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC16.89■□□□□ 0.29
TLR9Q9NR96 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
TLR9Q9NR96 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.88■□□□□ 0.29
TLR9Q9NR96 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR9Q9NR96 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
TLR9Q9NR96 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC16.88■□□□□ 0.29
TLR9Q9NR96 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TLR9Q9NR96 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
TLR9Q9NR96 UBALD1-205ENST00000590891 2641 ntBASIC16.88■□□□□ 0.29
TLR9Q9NR96 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR9Q9NR96 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR9Q9NR96 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
TLR9Q9NR96 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms