Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CHRDL1Q9BU40 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC12.83□□□□□ -0.35
CHRDL1Q9BU40 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CHRDL1Q9BU40 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CHRDL1Q9BU40 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CHRDL1Q9BU40 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CHRDL1Q9BU40 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 LINC01144-201ENST00000626198 1710 ntBASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 CRCP-205ENST00000431089 942 ntTSL 2 BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 RHOQP3-201ENST00000437982 621 ntBASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 RPL13AP23-201ENST00000480739 586 ntBASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 AL031055.1-201ENST00000606362 631 ntBASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CHRDL1Q9BU40 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 AL596087.1-201ENST00000400979 1969 ntBASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 DPM2-202ENST00000373110 738 ntTSL 2 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 AL590627.1-203ENST00000421194 1026 ntBASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 AC007967.2-201ENST00000432613 625 ntBASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 RPL18-209ENST00000550645 463 ntTSL 5 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 RPL18-214ENST00000552588 559 ntTSL 3 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 RPL28-209ENST00000560055 670 ntTSL 3 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 AC018845.2-201ENST00000568326 409 ntBASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 AC064836.3-201ENST00000607928 673 ntBASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 AC020765.3-201ENST00000613051 740 ntBASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 HLA-DQB2-231ENST00000435145 2026 ntBASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CHRDL1Q9BU40 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC12.82□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms