Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
VRK1Q99986 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.26□□□□□ -0.13
VRK1Q99986 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VRK1Q99986 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.25□□□□□ -0.13
VRK1Q99986 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
VRK1Q99986 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.25□□□□□ -0.13
VRK1Q99986 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC14.25□□□□□ -0.13
VRK1Q99986 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
VRK1Q99986 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC14.25□□□□□ -0.13
VRK1Q99986 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.25□□□□□ -0.13
VRK1Q99986 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.25□□□□□ -0.13
VRK1Q99986 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 AL139400.1-201ENST00000366220 510 ntBASIC14.25□□□□□ -0.13
VRK1Q99986 AL627223.1-201ENST00000416693 442 ntBASIC14.25□□□□□ -0.13
VRK1Q99986 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC14.25□□□□□ -0.13
VRK1Q99986 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
VRK1Q99986 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC14.25□□□□□ -0.13
VRK1Q99986 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.25□□□□□ -0.13
VRK1Q99986 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
VRK1Q99986 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.25□□□□□ -0.13
VRK1Q99986 RNF34-208ENST00000555076 593 ntTSL 3 BASIC14.25□□□□□ -0.13
VRK1Q99986 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14.25□□□□□ -0.13
VRK1Q99986 LSM12-202ENST00000585388 942 ntTSL 3 BASIC14.25□□□□□ -0.13
VRK1Q99986 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
VRK1Q99986 AP002414.2-201ENST00000591780 3365 ntBASIC14.25□□□□□ -0.13
VRK1Q99986 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VRK1Q99986 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.25□□□□□ -0.13
VRK1Q99986 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VRK1Q99986 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.25□□□□□ -0.13
VRK1Q99986 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.25□□□□□ -0.13
VRK1Q99986 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.25□□□□□ -0.13
VRK1Q99986 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
VRK1Q99986 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.25□□□□□ -0.13
VRK1Q99986 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
VRK1Q99986 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.24□□□□□ -0.13
VRK1Q99986 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC14.24□□□□□ -0.13
VRK1Q99986 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC14.24□□□□□ -0.13
VRK1Q99986 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.24□□□□□ -0.13
VRK1Q99986 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
VRK1Q99986 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VRK1Q99986 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
VRK1Q99986 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
VRK1Q99986 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 RNU1-129P-201ENST00000384064 167 ntBASIC14.24□□□□□ -0.13
VRK1Q99986 PMS2P4-201ENST00000412466 1052 ntBASIC14.24□□□□□ -0.13
VRK1Q99986 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.24□□□□□ -0.13
VRK1Q99986 AC092474.2-201ENST00000424288 719 ntBASIC14.24□□□□□ -0.13
VRK1Q99986 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.24□□□□□ -0.13
VRK1Q99986 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC14.24□□□□□ -0.13
VRK1Q99986 FAM86GP-201ENST00000448322 971 ntBASIC14.24□□□□□ -0.13
VRK1Q99986 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
VRK1Q99986 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC14.24□□□□□ -0.13
VRK1Q99986 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.24□□□□□ -0.13
VRK1Q99986 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.24□□□□□ -0.13
VRK1Q99986 AC243562.1-201ENST00000560672 389 ntBASIC14.24□□□□□ -0.13
VRK1Q99986 U1.21-201ENST00000580816 167 ntBASIC14.24□□□□□ -0.13
VRK1Q99986 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.24□□□□□ -0.13
VRK1Q99986 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
VRK1Q99986 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms