Protein–RNA interactions for Protein: Q99853

FOXB1, Forkhead box protein B1, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXB1Q99853 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
FOXB1Q99853 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
FOXB1Q99853 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
FOXB1Q99853 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXB1Q99853 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
FOXB1Q99853 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXB1Q99853 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXB1Q99853 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXB1Q99853 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
FOXB1Q99853 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FOXB1Q99853 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXB1Q99853 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXB1Q99853 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.11□□□□□ -0.15
FOXB1Q99853 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXB1Q99853 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXB1Q99853 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXB1Q99853 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.11□□□□□ -0.15
FOXB1Q99853 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXB1Q99853 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC14.11□□□□□ -0.15
FOXB1Q99853 COQ9-214ENST00000567933 882 ntTSL 3 BASIC14.11□□□□□ -0.15
FOXB1Q99853 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.11□□□□□ -0.15
FOXB1Q99853 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.11□□□□□ -0.15
FOXB1Q99853 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.11□□□□□ -0.15
FOXB1Q99853 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
FOXB1Q99853 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.11□□□□□ -0.15
FOXB1Q99853 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 TUBB3P1-201ENST00000405796 1332 ntBASIC14.11□□□□□ -0.15
FOXB1Q99853 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
FOXB1Q99853 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.1□□□□□ -0.15
FOXB1Q99853 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.1□□□□□ -0.15
FOXB1Q99853 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXB1Q99853 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXB1Q99853 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXB1Q99853 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
FOXB1Q99853 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
FOXB1Q99853 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXB1Q99853 AP003680.1-201ENST00000598970 3660 ntBASIC14.1□□□□□ -0.15
FOXB1Q99853 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXB1Q99853 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.1□□□□□ -0.15
FOXB1Q99853 DYNLL2-201ENST00000579991 6805 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXB1Q99853 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC14.1□□□□□ -0.15
FOXB1Q99853 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.1□□□□□ -0.15
FOXB1Q99853 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXB1Q99853 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXB1Q99853 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXB1Q99853 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXB1Q99853 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXB1Q99853 KRT8P37-201ENST00000451609 1420 ntBASIC14.1□□□□□ -0.15
FOXB1Q99853 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXB1Q99853 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXB1Q99853 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXB1Q99853 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
FOXB1Q99853 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
FOXB1Q99853 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXB1Q99853 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
FOXB1Q99853 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXB1Q99853 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXB1Q99853 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.1□□□□□ -0.15
FOXB1Q99853 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.1□□□□□ -0.15
FOXB1Q99853 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXB1Q99853 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXB1Q99853 FAM86GP-201ENST00000448322 971 ntBASIC14.1□□□□□ -0.15
FOXB1Q99853 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.1□□□□□ -0.15
FOXB1Q99853 PPP6R2P1-201ENST00000450880 1275 ntBASIC14.1□□□□□ -0.15
FOXB1Q99853 AC125807.1-201ENST00000483097 614 ntBASIC14.1□□□□□ -0.15
FOXB1Q99853 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXB1Q99853 AC067863.1-201ENST00000494933 530 ntBASIC14.1□□□□□ -0.15
FOXB1Q99853 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
FOXB1Q99853 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXB1Q99853 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.1□□□□□ -0.15
FOXB1Q99853 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.1□□□□□ -0.15
FOXB1Q99853 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC14.1□□□□□ -0.15
FOXB1Q99853 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC14.1□□□□□ -0.15
FOXB1Q99853 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.1□□□□□ -0.15
FOXB1Q99853 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
FOXB1Q99853 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms