Protein–RNA interactions for Protein: Q96PB8

LRRC3B, Leucine-rich repeat-containing protein 3B, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3BQ96PB8 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC3BQ96PB8 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
LRRC3BQ96PB8 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC3BQ96PB8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC3BQ96PB8 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC3BQ96PB8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC3BQ96PB8 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC3BQ96PB8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC3BQ96PB8 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC3BQ96PB8 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.22■□□□□ 0.19
LRRC3BQ96PB8 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
LRRC3BQ96PB8 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 DRD5P1-201ENST00000456605 1438 ntBASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 GZMB-202ENST00000382540 816 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 FO681548.1-201ENST00000455617 1132 ntBASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 AC026410.3-201ENST00000514280 936 ntBASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 RNA5SP412-201ENST00000516234 123 ntBASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 AP001063.1-201ENST00000568332 529 ntBASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 AD000864.1-201ENST00000624076 2295 ntBASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
LRRC3BQ96PB8 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.21■□□□□ 0.18
LRRC3BQ96PB8 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
LRRC3BQ96PB8 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.21■□□□□ 0.18
LRRC3BQ96PB8 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
LRRC3BQ96PB8 OS9-205ENST00000413095 1660 ntTSL 2 BASIC16.21■□□□□ 0.18
LRRC3BQ96PB8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
LRRC3BQ96PB8 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 CMC2-214ENST00000565925 640 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 AC009486.1-201ENST00000569860 813 ntBASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 GNRHR2-203ENST00000581100 1187 ntBASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 AC018695.7-201ENST00000624587 2492 ntBASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
LRRC3BQ96PB8 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
LRRC3BQ96PB8 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC16.19■□□□□ 0.18
LRRC3BQ96PB8 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.19■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 1052.7 ms